Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CSMD1Q96PZ7 GNE-204ENST00000539208 2190 ntTSL 2 BASIC13.78□□□□□ -0.2
CSMD1Q96PZ7 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CSMD1Q96PZ7 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC13.78□□□□□ -0.2
CSMD1Q96PZ7 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CSMD1Q96PZ7 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC13.78□□□□□ -0.2
CSMD1Q96PZ7 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CSMD1Q96PZ7 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CSMD1Q96PZ7 USE1-206ENST00000595101 1776 ntTSL 2 BASIC13.78□□□□□ -0.2
CSMD1Q96PZ7 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CSMD1Q96PZ7 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CSMD1Q96PZ7 KRT18P66-201ENST00000452970 1269 ntBASIC13.78□□□□□ -0.2
CSMD1Q96PZ7 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.78□□□□□ -0.2
CSMD1Q96PZ7 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CSMD1Q96PZ7 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC13.78□□□□□ -0.2
CSMD1Q96PZ7 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CSMD1Q96PZ7 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CSMD1Q96PZ7 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
CSMD1Q96PZ7 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CSMD1Q96PZ7 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
CSMD1Q96PZ7 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
CSMD1Q96PZ7 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC13.77□□□□□ -0.2
CSMD1Q96PZ7 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
CSMD1Q96PZ7 AC092053.1-201ENST00000605787 1936 ntBASIC13.77□□□□□ -0.2
CSMD1Q96PZ7 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC13.77□□□□□ -0.2
CSMD1Q96PZ7 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC13.77□□□□□ -0.2
CSMD1Q96PZ7 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC13.77□□□□□ -0.2
CSMD1Q96PZ7 AC244669.2-201ENST00000612320 853 ntBASIC13.77□□□□□ -0.2
CSMD1Q96PZ7 PRKN-211ENST00000615065 261 ntTSL 5 BASIC13.77□□□□□ -0.2
CSMD1Q96PZ7 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
CSMD1Q96PZ7 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CSMD1Q96PZ7 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
CSMD1Q96PZ7 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CSMD1Q96PZ7 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
CSMD1Q96PZ7 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC13.77□□□□□ -0.2
CSMD1Q96PZ7 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CSMD1Q96PZ7 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC13.77□□□□□ -0.21
CSMD1Q96PZ7 AC020914.3-201ENST00000594712 304 ntBASIC13.77□□□□□ -0.21
CSMD1Q96PZ7 AC097724.1-201ENST00000609581 426 ntBASIC13.77□□□□□ -0.21
CSMD1Q96PZ7 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CSMD1Q96PZ7 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CSMD1Q96PZ7 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CSMD1Q96PZ7 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CSMD1Q96PZ7 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC13.77□□□□□ -0.21
CSMD1Q96PZ7 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CSMD1Q96PZ7 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
CSMD1Q96PZ7 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CSMD1Q96PZ7 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CSMD1Q96PZ7 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CSMD1Q96PZ7 SPDYE17-201ENST00000412399 783 ntBASIC13.77□□□□□ -0.21
CSMD1Q96PZ7 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC13.77□□□□□ -0.21
CSMD1Q96PZ7 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC13.77□□□□□ -0.21
CSMD1Q96PZ7 MAX-210ENST00000555419 765 ntTSL 5 BASIC13.77□□□□□ -0.21
CSMD1Q96PZ7 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.77□□□□□ -0.21
CSMD1Q96PZ7 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CSMD1Q96PZ7 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC13.76□□□□□ -0.21
CSMD1Q96PZ7 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
CSMD1Q96PZ7 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC13.76□□□□□ -0.21
CSMD1Q96PZ7 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CSMD1Q96PZ7 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC13.76□□□□□ -0.21
CSMD1Q96PZ7 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CSMD1Q96PZ7 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC13.76□□□□□ -0.21
CSMD1Q96PZ7 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC13.76□□□□□ -0.21
CSMD1Q96PZ7 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC13.76□□□□□ -0.21
CSMD1Q96PZ7 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC13.76□□□□□ -0.21
CSMD1Q96PZ7 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC13.76□□□□□ -0.21
CSMD1Q96PZ7 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC13.76□□□□□ -0.21
CSMD1Q96PZ7 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CSMD1Q96PZ7 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CSMD1Q96PZ7 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CSMD1Q96PZ7 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CSMD1Q96PZ7 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.76□□□□□ -0.21
CSMD1Q96PZ7 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CSMD1Q96PZ7 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CSMD1Q96PZ7 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC13.76□□□□□ -0.21
CSMD1Q96PZ7 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
CSMD1Q96PZ7 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CSMD1Q96PZ7 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CSMD1Q96PZ7 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
CSMD1Q96PZ7 AC114501.1-201ENST00000445949 172 ntBASIC13.76□□□□□ -0.21
CSMD1Q96PZ7 CYP2A7P1-201ENST00000595391 815 ntBASIC13.76□□□□□ -0.21
CSMD1Q96PZ7 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CSMD1Q96PZ7 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CSMD1Q96PZ7 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CSMD1Q96PZ7 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CSMD1Q96PZ7 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC13.76□□□□□ -0.21
CSMD1Q96PZ7 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.76□□□□□ -0.21
CSMD1Q96PZ7 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC13.76□□□□□ -0.21
CSMD1Q96PZ7 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CSMD1Q96PZ7 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CSMD1Q96PZ7 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CSMD1Q96PZ7 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CSMD1Q96PZ7 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
CSMD1Q96PZ7 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CSMD1Q96PZ7 PTPA-217ENST00000434095 870 ntTSL 2 BASIC13.76□□□□□ -0.21
CSMD1Q96PZ7 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC13.76□□□□□ -0.21
CSMD1Q96PZ7 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC13.76□□□□□ -0.21
CSMD1Q96PZ7 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC13.76□□□□□ -0.21
CSMD1Q96PZ7 TDH-203ENST00000531764 1110 ntBASIC13.76□□□□□ -0.21
CSMD1Q96PZ7 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms