Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 IGHV3OR16-6-201ENST00000568775 360 ntBASIC19.41■□□□□ 0.7
NEK1Q96PY6 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NEK1Q96PY6 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NEK1Q96PY6 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
NEK1Q96PY6 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NEK1Q96PY6 PMS2P7-201ENST00000506558 1336 ntBASIC19.41■□□□□ 0.7
NEK1Q96PY6 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NEK1Q96PY6 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
NEK1Q96PY6 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
NEK1Q96PY6 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
NEK1Q96PY6 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NEK1Q96PY6 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NEK1Q96PY6 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
NEK1Q96PY6 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC19.41■□□□□ 0.7
NEK1Q96PY6 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
NEK1Q96PY6 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC19.41■□□□□ 0.7
NEK1Q96PY6 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC19.41■□□□□ 0.7
NEK1Q96PY6 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
NEK1Q96PY6 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NEK1Q96PY6 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
NEK1Q96PY6 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
NEK1Q96PY6 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
NEK1Q96PY6 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NEK1Q96PY6 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
NEK1Q96PY6 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NEK1Q96PY6 ACE-204ENST00000428043 5120 ntTSL 2 BASIC19.4■□□□□ 0.7
NEK1Q96PY6 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NEK1Q96PY6 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NEK1Q96PY6 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NEK1Q96PY6 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC19.4■□□□□ 0.7
NEK1Q96PY6 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NEK1Q96PY6 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
NEK1Q96PY6 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NEK1Q96PY6 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC19.4■□□□□ 0.7
NEK1Q96PY6 AL671277.1-201ENST00000429656 993 ntBASIC19.4■□□□□ 0.7
NEK1Q96PY6 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
NEK1Q96PY6 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
NEK1Q96PY6 PRYP6-201ENST00000514804 343 ntBASIC19.4■□□□□ 0.7
NEK1Q96PY6 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC19.4■□□□□ 0.7
NEK1Q96PY6 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NEK1Q96PY6 AL138918.1-201ENST00000568306 659 ntBASIC19.4■□□□□ 0.7
NEK1Q96PY6 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC19.4■□□□□ 0.7
NEK1Q96PY6 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NEK1Q96PY6 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NEK1Q96PY6 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NEK1Q96PY6 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC19.4■□□□□ 0.7
NEK1Q96PY6 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC19.4■□□□□ 0.7
NEK1Q96PY6 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
NEK1Q96PY6 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NEK1Q96PY6 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC19.4■□□□□ 0.7
NEK1Q96PY6 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC19.4■□□□□ 0.7
NEK1Q96PY6 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
NEK1Q96PY6 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
NEK1Q96PY6 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
NEK1Q96PY6 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
NEK1Q96PY6 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
NEK1Q96PY6 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
NEK1Q96PY6 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC19.39■□□□□ 0.69
NEK1Q96PY6 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NEK1Q96PY6 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NEK1Q96PY6 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NEK1Q96PY6 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
NEK1Q96PY6 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC19.39■□□□□ 0.69
NEK1Q96PY6 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
NEK1Q96PY6 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NEK1Q96PY6 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC19.39■□□□□ 0.69
NEK1Q96PY6 AL355306.1-201ENST00000415580 579 ntBASIC19.39■□□□□ 0.69
NEK1Q96PY6 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC19.39■□□□□ 0.69
NEK1Q96PY6 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NEK1Q96PY6 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
NEK1Q96PY6 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC19.39■□□□□ 0.69
NEK1Q96PY6 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
NEK1Q96PY6 FHL2-212ENST00000607522 759 ntTSL 2 BASIC19.39■□□□□ 0.69
NEK1Q96PY6 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NEK1Q96PY6 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NEK1Q96PY6 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NEK1Q96PY6 BSG-215ENST00000618006 1329 ntTSL 2 BASIC19.39■□□□□ 0.69
NEK1Q96PY6 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NEK1Q96PY6 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NEK1Q96PY6 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NEK1Q96PY6 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC19.39■□□□□ 0.69
NEK1Q96PY6 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NEK1Q96PY6 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NEK1Q96PY6 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
NEK1Q96PY6 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC19.39■□□□□ 0.69
NEK1Q96PY6 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC19.39■□□□□ 0.69
NEK1Q96PY6 AL365203.3-201ENST00000609742 2057 ntBASIC19.39■□□□□ 0.69
NEK1Q96PY6 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NEK1Q96PY6 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
NEK1Q96PY6 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NEK1Q96PY6 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC19.38■□□□□ 0.69
NEK1Q96PY6 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
NEK1Q96PY6 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NEK1Q96PY6 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NEK1Q96PY6 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NEK1Q96PY6 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
NEK1Q96PY6 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC19.38■□□□□ 0.69
NEK1Q96PY6 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NEK1Q96PY6 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC19.38■□□□□ 0.69
NEK1Q96PY6 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms