Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CCDC85AQ96PX6 AC005622.1-201ENST00000636801 1703 ntBASIC20.3■□□□□ 0.84
CCDC85AQ96PX6 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
CCDC85AQ96PX6 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC85AQ96PX6 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC85AQ96PX6 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
CCDC85AQ96PX6 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC85AQ96PX6 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC85AQ96PX6 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC85AQ96PX6 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC85AQ96PX6 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CCDC85AQ96PX6 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC85AQ96PX6 METTL26-204ENST00000397665 558 ntTSL 2 BASIC20.3■□□□□ 0.84
CCDC85AQ96PX6 PIN1P1-201ENST00000412108 996 ntBASIC20.3■□□□□ 0.84
CCDC85AQ96PX6 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC20.3■□□□□ 0.84
CCDC85AQ96PX6 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC20.3■□□□□ 0.84
CCDC85AQ96PX6 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC20.3■□□□□ 0.84
CCDC85AQ96PX6 AL512361.1-201ENST00000554200 418 ntBASIC20.3■□□□□ 0.84
CCDC85AQ96PX6 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC20.3■□□□□ 0.84
CCDC85AQ96PX6 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC85AQ96PX6 AC004790.1-201ENST00000612686 536 ntBASIC20.3■□□□□ 0.84
CCDC85AQ96PX6 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC85AQ96PX6 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CCDC85AQ96PX6 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC20.3■□□□□ 0.84
CCDC85AQ96PX6 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
CCDC85AQ96PX6 AC106886.4-201ENST00000623557 2502 ntBASIC20.3■□□□□ 0.84
CCDC85AQ96PX6 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC85AQ96PX6 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC85AQ96PX6 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
CCDC85AQ96PX6 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC20.3■□□□□ 0.84
CCDC85AQ96PX6 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC85AQ96PX6 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC85AQ96PX6 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC85AQ96PX6 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC85AQ96PX6 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC85AQ96PX6 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC20.29■□□□□ 0.84
CCDC85AQ96PX6 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC20.29■□□□□ 0.84
CCDC85AQ96PX6 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC20.29■□□□□ 0.84
CCDC85AQ96PX6 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
CCDC85AQ96PX6 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC20.29■□□□□ 0.84
CCDC85AQ96PX6 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC85AQ96PX6 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CCDC85AQ96PX6 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC85AQ96PX6 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC85AQ96PX6 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC20.29■□□□□ 0.84
CCDC85AQ96PX6 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC85AQ96PX6 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC85AQ96PX6 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC20.29■□□□□ 0.84
CCDC85AQ96PX6 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC20.29■□□□□ 0.84
CCDC85AQ96PX6 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC20.29■□□□□ 0.84
CCDC85AQ96PX6 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC20.29■□□□□ 0.84
CCDC85AQ96PX6 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC85AQ96PX6 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC20.29■□□□□ 0.84
CCDC85AQ96PX6 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC20.29■□□□□ 0.84
CCDC85AQ96PX6 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC20.29■□□□□ 0.84
CCDC85AQ96PX6 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC20.29■□□□□ 0.84
CCDC85AQ96PX6 RAB34-223ENST00000636154 730 ntTSL 2 BASIC20.29■□□□□ 0.84
CCDC85AQ96PX6 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC85AQ96PX6 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC85AQ96PX6 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC20.29■□□□□ 0.84
CCDC85AQ96PX6 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC85AQ96PX6 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
CCDC85AQ96PX6 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC85AQ96PX6 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC85AQ96PX6 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC85AQ96PX6 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC85AQ96PX6 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC20.28■□□□□ 0.84
CCDC85AQ96PX6 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
CCDC85AQ96PX6 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CCDC85AQ96PX6 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
CCDC85AQ96PX6 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC85AQ96PX6 RPS19-201ENST00000221975 500 ntTSL 3 BASIC20.28■□□□□ 0.84
CCDC85AQ96PX6 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC85AQ96PX6 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC20.28■□□□□ 0.84
CCDC85AQ96PX6 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC20.28■□□□□ 0.84
CCDC85AQ96PX6 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC20.28■□□□□ 0.84
CCDC85AQ96PX6 SPDYE18-201ENST00000510091 1050 ntBASIC20.28■□□□□ 0.84
CCDC85AQ96PX6 AC044860.1-202ENST00000559481 777 ntBASIC20.28■□□□□ 0.84
CCDC85AQ96PX6 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC20.28■□□□□ 0.84
CCDC85AQ96PX6 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
CCDC85AQ96PX6 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC20.28■□□□□ 0.84
CCDC85AQ96PX6 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC85AQ96PX6 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC85AQ96PX6 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC85AQ96PX6 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC85AQ96PX6 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC20.28■□□□□ 0.84
CCDC85AQ96PX6 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CCDC85AQ96PX6 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC20.28■□□□□ 0.84
CCDC85AQ96PX6 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC20.28■□□□□ 0.84
CCDC85AQ96PX6 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC20.27■□□□□ 0.84
CCDC85AQ96PX6 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC85AQ96PX6 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC85AQ96PX6 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC85AQ96PX6 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
CCDC85AQ96PX6 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC85AQ96PX6 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC85AQ96PX6 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC85AQ96PX6 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
CCDC85AQ96PX6 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC85AQ96PX6 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms