Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.91■□□□□ 0.3
RPRD1AQ96P16 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.91■□□□□ 0.3
RPRD1AQ96P16 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RPRD1AQ96P16 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RPRD1AQ96P16 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RPRD1AQ96P16 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RPRD1AQ96P16 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
RPRD1AQ96P16 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RPRD1AQ96P16 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RPRD1AQ96P16 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
RPRD1AQ96P16 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RPRD1AQ96P16 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
RPRD1AQ96P16 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.9■□□□□ 0.3
RPRD1AQ96P16 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.9■□□□□ 0.3
RPRD1AQ96P16 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RPRD1AQ96P16 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RPRD1AQ96P16 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
RPRD1AQ96P16 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.9■□□□□ 0.3
RPRD1AQ96P16 POU5F1P6-201ENST00000466990 990 ntBASIC16.9■□□□□ 0.3
RPRD1AQ96P16 AC098859.1-201ENST00000502915 1238 ntBASIC16.9■□□□□ 0.3
RPRD1AQ96P16 ALG1L8P-201ENST00000533887 760 ntBASIC16.9■□□□□ 0.3
RPRD1AQ96P16 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.9■□□□□ 0.3
RPRD1AQ96P16 AC025678.2-201ENST00000562061 970 ntBASIC16.9■□□□□ 0.3
RPRD1AQ96P16 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.9■□□□□ 0.3
RPRD1AQ96P16 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RPRD1AQ96P16 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.9■□□□□ 0.3
RPRD1AQ96P16 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
RPRD1AQ96P16 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
RPRD1AQ96P16 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.9■□□□□ 0.3
RPRD1AQ96P16 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RPRD1AQ96P16 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RPRD1AQ96P16 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
RPRD1AQ96P16 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RPRD1AQ96P16 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RPRD1AQ96P16 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RPRD1AQ96P16 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RPRD1AQ96P16 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RPRD1AQ96P16 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
RPRD1AQ96P16 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RPRD1AQ96P16 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RPRD1AQ96P16 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.89■□□□□ 0.3
RPRD1AQ96P16 ME2P1-201ENST00000426028 1970 ntBASIC16.89■□□□□ 0.3
RPRD1AQ96P16 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
RPRD1AQ96P16 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RPRD1AQ96P16 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RPRD1AQ96P16 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RPRD1AQ96P16 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
RPRD1AQ96P16 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
RPRD1AQ96P16 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.89■□□□□ 0.29
RPRD1AQ96P16 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
RPRD1AQ96P16 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RPRD1AQ96P16 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
RPRD1AQ96P16 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.89■□□□□ 0.29
RPRD1AQ96P16 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
RPRD1AQ96P16 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.89■□□□□ 0.29
RPRD1AQ96P16 AC026150.2-201ENST00000564693 1156 ntBASIC16.89■□□□□ 0.29
RPRD1AQ96P16 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RPRD1AQ96P16 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.89■□□□□ 0.29
RPRD1AQ96P16 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RPRD1AQ96P16 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RPRD1AQ96P16 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.89■□□□□ 0.29
RPRD1AQ96P16 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
RPRD1AQ96P16 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RPRD1AQ96P16 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RPRD1AQ96P16 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RPRD1AQ96P16 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RPRD1AQ96P16 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.29
RPRD1AQ96P16 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
RPRD1AQ96P16 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.89■□□□□ 0.29
RPRD1AQ96P16 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RPRD1AQ96P16 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.89■□□□□ 0.29
RPRD1AQ96P16 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.89■□□□□ 0.29
RPRD1AQ96P16 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
RPRD1AQ96P16 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RPRD1AQ96P16 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.89■□□□□ 0.29
RPRD1AQ96P16 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.89■□□□□ 0.29
RPRD1AQ96P16 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.89■□□□□ 0.29
RPRD1AQ96P16 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RPRD1AQ96P16 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.88■□□□□ 0.29
RPRD1AQ96P16 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPRD1AQ96P16 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.88■□□□□ 0.29
RPRD1AQ96P16 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
RPRD1AQ96P16 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPRD1AQ96P16 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RPRD1AQ96P16 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.88■□□□□ 0.29
RPRD1AQ96P16 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.88■□□□□ 0.29
RPRD1AQ96P16 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPRD1AQ96P16 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.88■□□□□ 0.29
RPRD1AQ96P16 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
RPRD1AQ96P16 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPRD1AQ96P16 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.88■□□□□ 0.29
RPRD1AQ96P16 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPRD1AQ96P16 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
RPRD1AQ96P16 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.88■□□□□ 0.29
RPRD1AQ96P16 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RPRD1AQ96P16 AL589702.1-201ENST00000641229 1509 ntBASIC16.88■□□□□ 0.29
RPRD1AQ96P16 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPRD1AQ96P16 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RPRD1AQ96P16 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RPRD1AQ96P16 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms