Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC19.16■□□□□ 0.66
TRIM47Q96LD4 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
TRIM47Q96LD4 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM47Q96LD4 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM47Q96LD4 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM47Q96LD4 AC098614.1-201ENST00000368528 745 ntBASIC19.16■□□□□ 0.66
TRIM47Q96LD4 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM47Q96LD4 DGCR5-201ENST00000399539 862 ntBASIC19.16■□□□□ 0.66
TRIM47Q96LD4 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC19.16■□□□□ 0.66
TRIM47Q96LD4 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC19.16■□□□□ 0.66
TRIM47Q96LD4 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC19.16■□□□□ 0.66
TRIM47Q96LD4 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC19.16■□□□□ 0.66
TRIM47Q96LD4 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC19.16■□□□□ 0.66
TRIM47Q96LD4 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
TRIM47Q96LD4 AC105233.2-201ENST00000523697 349 ntBASIC19.16■□□□□ 0.66
TRIM47Q96LD4 AF228730.5-201ENST00000530288 346 ntBASIC19.16■□□□□ 0.66
TRIM47Q96LD4 AC091167.2-201ENST00000579581 588 ntBASIC19.16■□□□□ 0.66
TRIM47Q96LD4 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM47Q96LD4 AC017083.2-201ENST00000608069 979 ntBASIC19.16■□□□□ 0.66
TRIM47Q96LD4 AL844908.2-201ENST00000609461 460 ntBASIC19.16■□□□□ 0.66
TRIM47Q96LD4 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM47Q96LD4 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM47Q96LD4 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
TRIM47Q96LD4 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC19.16■□□□□ 0.66
TRIM47Q96LD4 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
TRIM47Q96LD4 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM47Q96LD4 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM47Q96LD4 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM47Q96LD4 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM47Q96LD4 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM47Q96LD4 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
TRIM47Q96LD4 AC124067.4-201ENST00000519691 2379 ntBASIC19.15■□□□□ 0.66
TRIM47Q96LD4 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM47Q96LD4 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM47Q96LD4 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM47Q96LD4 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM47Q96LD4 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM47Q96LD4 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM47Q96LD4 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM47Q96LD4 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
TRIM47Q96LD4 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC19.15■□□□□ 0.66
TRIM47Q96LD4 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
TRIM47Q96LD4 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM47Q96LD4 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM47Q96LD4 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC19.15■□□□□ 0.66
TRIM47Q96LD4 AC079776.1-201ENST00000401540 1152 ntBASIC19.15■□□□□ 0.66
TRIM47Q96LD4 RPS2P32-201ENST00000439199 892 ntBASIC19.15■□□□□ 0.66
TRIM47Q96LD4 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC19.15■□□□□ 0.66
TRIM47Q96LD4 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC19.15■□□□□ 0.66
TRIM47Q96LD4 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC19.15■□□□□ 0.66
TRIM47Q96LD4 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
TRIM47Q96LD4 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM47Q96LD4 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
TRIM47Q96LD4 TEX28P1-201ENST00000613479 1221 ntBASIC19.15■□□□□ 0.66
TRIM47Q96LD4 TEX28P2-201ENST00000617764 1221 ntBASIC19.15■□□□□ 0.66
TRIM47Q96LD4 AC004840.1-201ENST00000636359 365 ntBASIC19.15■□□□□ 0.66
TRIM47Q96LD4 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC19.15■□□□□ 0.66
TRIM47Q96LD4 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM47Q96LD4 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
TRIM47Q96LD4 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM47Q96LD4 AC087499.5-201ENST00000452760 1342 ntBASIC19.15■□□□□ 0.66
TRIM47Q96LD4 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC19.15■□□□□ 0.66
TRIM47Q96LD4 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM47Q96LD4 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC19.15■□□□□ 0.66
TRIM47Q96LD4 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM47Q96LD4 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM47Q96LD4 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM47Q96LD4 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC19.15■□□□□ 0.66
TRIM47Q96LD4 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
TRIM47Q96LD4 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC19.15■□□□□ 0.66
TRIM47Q96LD4 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM47Q96LD4 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
TRIM47Q96LD4 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
TRIM47Q96LD4 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC19.14■□□□□ 0.66
TRIM47Q96LD4 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
TRIM47Q96LD4 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM47Q96LD4 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM47Q96LD4 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC19.14■□□□□ 0.65
TRIM47Q96LD4 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM47Q96LD4 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM47Q96LD4 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM47Q96LD4 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC19.14■□□□□ 0.65
TRIM47Q96LD4 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC19.14■□□□□ 0.65
TRIM47Q96LD4 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC19.14■□□□□ 0.65
TRIM47Q96LD4 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC19.14■□□□□ 0.65
TRIM47Q96LD4 MIR1909-201ENST00000411312 80 ntBASIC19.14■□□□□ 0.65
TRIM47Q96LD4 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
TRIM47Q96LD4 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC19.14■□□□□ 0.65
TRIM47Q96LD4 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC19.14■□□□□ 0.65
TRIM47Q96LD4 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC19.14■□□□□ 0.65
TRIM47Q96LD4 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC19.14■□□□□ 0.65
TRIM47Q96LD4 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC19.14■□□□□ 0.65
TRIM47Q96LD4 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
TRIM47Q96LD4 PRR29-204ENST00000577953 565 ntTSL 4 BASIC19.14■□□□□ 0.65
TRIM47Q96LD4 RNA5-8SN1-201ENST00000610460 153 ntBASIC19.14■□□□□ 0.65
TRIM47Q96LD4 RNA5-8SN5-202ENST00000612463 153 ntBASIC19.14■□□□□ 0.65
TRIM47Q96LD4 RNA5-8SN4-201ENST00000613359 153 ntBASIC19.14■□□□□ 0.65
TRIM47Q96LD4 RNA5-8SN5-201ENST00000619471 153 ntBASIC19.14■□□□□ 0.65
TRIM47Q96LD4 RAB34-223ENST00000636154 730 ntTSL 2 BASIC19.14■□□□□ 0.65
TRIM47Q96LD4 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms