Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CPNE2Q96FN4 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CPNE2Q96FN4 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CPNE2Q96FN4 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CPNE2Q96FN4 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
CPNE2Q96FN4 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC14.36□□□□□ -0.11
CPNE2Q96FN4 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CPNE2Q96FN4 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE2Q96FN4 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE2Q96FN4 PI4KAP1-204ENST00000612579 1703 ntBASIC14.35□□□□□ -0.11
CPNE2Q96FN4 AC131009.4-201ENST00000624048 1740 ntBASIC14.35□□□□□ -0.11
CPNE2Q96FN4 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE2Q96FN4 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.35□□□□□ -0.11
CPNE2Q96FN4 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE2Q96FN4 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.35□□□□□ -0.11
CPNE2Q96FN4 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE2Q96FN4 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.35□□□□□ -0.11
CPNE2Q96FN4 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE2Q96FN4 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.35□□□□□ -0.11
CPNE2Q96FN4 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE2Q96FN4 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE2Q96FN4 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CPNE2Q96FN4 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE2Q96FN4 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE2Q96FN4 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE2Q96FN4 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC14.35□□□□□ -0.11
CPNE2Q96FN4 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE2Q96FN4 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC14.35□□□□□ -0.11
CPNE2Q96FN4 AC087163.2-201ENST00000457299 853 ntBASIC14.35□□□□□ -0.11
CPNE2Q96FN4 FOSL1P1-201ENST00000511041 816 ntBASIC14.35□□□□□ -0.11
CPNE2Q96FN4 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC14.35□□□□□ -0.11
CPNE2Q96FN4 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE2Q96FN4 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE2Q96FN4 MIR3652-201ENST00000579335 131 ntBASIC14.35□□□□□ -0.11
CPNE2Q96FN4 AC005412.3-201ENST00000580309 715 ntBASIC14.35□□□□□ -0.11
CPNE2Q96FN4 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE2Q96FN4 GGTLC5P-201ENST00000617623 998 ntBASIC14.35□□□□□ -0.11
CPNE2Q96FN4 AC004706.3-202ENST00000621574 984 ntBASIC14.35□□□□□ -0.11
CPNE2Q96FN4 AC093458.2-201ENST00000623150 629 ntBASIC14.35□□□□□ -0.11
CPNE2Q96FN4 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC14.35□□□□□ -0.11
CPNE2Q96FN4 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE2Q96FN4 AL805961.1-202ENST00000641562 540 ntBASIC14.35□□□□□ -0.11
CPNE2Q96FN4 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE2Q96FN4 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE2Q96FN4 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.35□□□□□ -0.11
CPNE2Q96FN4 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE2Q96FN4 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE2Q96FN4 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE2Q96FN4 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
CPNE2Q96FN4 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.35□□□□□ -0.11
CPNE2Q96FN4 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.35□□□□□ -0.11
CPNE2Q96FN4 AL662844.4-201ENST00000606367 2838 ntBASIC14.35□□□□□ -0.11
CPNE2Q96FN4 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE2Q96FN4 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
CPNE2Q96FN4 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE2Q96FN4 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.35□□□□□ -0.11
CPNE2Q96FN4 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC14.35□□□□□ -0.11
CPNE2Q96FN4 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE2Q96FN4 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE2Q96FN4 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
CPNE2Q96FN4 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.35□□□□□ -0.11
CPNE2Q96FN4 LINC01144-201ENST00000626198 1710 ntBASIC14.35□□□□□ -0.11
CPNE2Q96FN4 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE2Q96FN4 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE2Q96FN4 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE2Q96FN4 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC14.35□□□□□ -0.11
CPNE2Q96FN4 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE2Q96FN4 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CPNE2Q96FN4 PAN3-AS1-201ENST00000563843 1351 ntBASIC14.34□□□□□ -0.11
CPNE2Q96FN4 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
CPNE2Q96FN4 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE2Q96FN4 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.34□□□□□ -0.11
CPNE2Q96FN4 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE2Q96FN4 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE2Q96FN4 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.34□□□□□ -0.11
CPNE2Q96FN4 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
CPNE2Q96FN4 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE2Q96FN4 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
CPNE2Q96FN4 GCK-202ENST00000345378 2421 ntTSL 2 BASIC14.34□□□□□ -0.11
CPNE2Q96FN4 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE2Q96FN4 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC14.34□□□□□ -0.11
CPNE2Q96FN4 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.34□□□□□ -0.11
CPNE2Q96FN4 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CPNE2Q96FN4 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.34□□□□□ -0.11
CPNE2Q96FN4 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE2Q96FN4 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE2Q96FN4 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
CPNE2Q96FN4 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
CPNE2Q96FN4 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.34□□□□□ -0.11
CPNE2Q96FN4 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE2Q96FN4 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE2Q96FN4 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE2Q96FN4 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE2Q96FN4 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE2Q96FN4 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE2Q96FN4 HCG4-201ENST00000418983 998 ntBASIC14.34□□□□□ -0.11
CPNE2Q96FN4 LAGE3P1-201ENST00000425356 484 ntBASIC14.34□□□□□ -0.11
CPNE2Q96FN4 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.34□□□□□ -0.11
CPNE2Q96FN4 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE2Q96FN4 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms