Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TRIM43Q96BQ3 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
TRIM43Q96BQ3 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM43Q96BQ3 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM43Q96BQ3 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC17.58■□□□□ 0.4
TRIM43Q96BQ3 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC17.58■□□□□ 0.4
TRIM43Q96BQ3 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC17.58■□□□□ 0.4
TRIM43Q96BQ3 CLUHP6-201ENST00000580789 941 ntBASIC17.58■□□□□ 0.4
TRIM43Q96BQ3 SPIB-207ENST00000597855 564 ntTSL 4 BASIC17.58■□□□□ 0.4
TRIM43Q96BQ3 AL021578.1-201ENST00000613646 709 ntBASIC17.58■□□□□ 0.4
TRIM43Q96BQ3 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC17.58■□□□□ 0.4
TRIM43Q96BQ3 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC17.58■□□□□ 0.4
TRIM43Q96BQ3 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.58■□□□□ 0.4
TRIM43Q96BQ3 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM43Q96BQ3 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
TRIM43Q96BQ3 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM43Q96BQ3 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM43Q96BQ3 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM43Q96BQ3 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
TRIM43Q96BQ3 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM43Q96BQ3 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.58■□□□□ 0.4
TRIM43Q96BQ3 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
TRIM43Q96BQ3 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.58■□□□□ 0.4
TRIM43Q96BQ3 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
TRIM43Q96BQ3 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
TRIM43Q96BQ3 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.57■□□□□ 0.4
TRIM43Q96BQ3 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM43Q96BQ3 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM43Q96BQ3 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM43Q96BQ3 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM43Q96BQ3 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM43Q96BQ3 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM43Q96BQ3 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
TRIM43Q96BQ3 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM43Q96BQ3 AC134915.1-201ENST00000426461 574 ntBASIC17.57■□□□□ 0.4
TRIM43Q96BQ3 AC016694.1-201ENST00000434179 700 ntBASIC17.57■□□□□ 0.4
TRIM43Q96BQ3 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC17.57■□□□□ 0.4
TRIM43Q96BQ3 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC17.57■□□□□ 0.4
TRIM43Q96BQ3 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
TRIM43Q96BQ3 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC17.57■□□□□ 0.4
TRIM43Q96BQ3 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC17.57■□□□□ 0.4
TRIM43Q96BQ3 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM43Q96BQ3 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC17.57■□□□□ 0.4
TRIM43Q96BQ3 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC17.57■□□□□ 0.4
TRIM43Q96BQ3 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC17.57■□□□□ 0.4
TRIM43Q96BQ3 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM43Q96BQ3 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.57■□□□□ 0.4
TRIM43Q96BQ3 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.57■□□□□ 0.4
TRIM43Q96BQ3 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM43Q96BQ3 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM43Q96BQ3 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM43Q96BQ3 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
TRIM43Q96BQ3 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
TRIM43Q96BQ3 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.57■□□□□ 0.4
TRIM43Q96BQ3 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM43Q96BQ3 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM43Q96BQ3 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM43Q96BQ3 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM43Q96BQ3 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
TRIM43Q96BQ3 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM43Q96BQ3 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM43Q96BQ3 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.56■□□□□ 0.4
TRIM43Q96BQ3 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM43Q96BQ3 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC17.56■□□□□ 0.4
TRIM43Q96BQ3 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
TRIM43Q96BQ3 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.56■□□□□ 0.4
TRIM43Q96BQ3 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM43Q96BQ3 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC17.56■□□□□ 0.4
TRIM43Q96BQ3 GGT4P-201ENST00000623672 1708 ntBASIC17.56■□□□□ 0.4
TRIM43Q96BQ3 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM43Q96BQ3 AC008764.6-201ENST00000595909 2069 ntBASIC17.56■□□□□ 0.4
TRIM43Q96BQ3 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
TRIM43Q96BQ3 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
TRIM43Q96BQ3 CROCCP2-202ENST00000412962 2773 ntBASIC17.56■□□□□ 0.4
TRIM43Q96BQ3 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.56■□□□□ 0.4
TRIM43Q96BQ3 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM43Q96BQ3 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM43Q96BQ3 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
TRIM43Q96BQ3 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC17.56■□□□□ 0.4
TRIM43Q96BQ3 BAATP1-201ENST00000412284 1225 ntBASIC17.56■□□□□ 0.4
TRIM43Q96BQ3 SLC25A24P2-201ENST00000415059 510 ntBASIC17.56■□□□□ 0.4
TRIM43Q96BQ3 AC074338.1-201ENST00000416825 156 ntBASIC17.56■□□□□ 0.4
TRIM43Q96BQ3 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM43Q96BQ3 IGHJ2P-201ENST00000454480 60 ntBASIC17.56■□□□□ 0.4
TRIM43Q96BQ3 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC17.56■□□□□ 0.4
TRIM43Q96BQ3 AC079316.1-201ENST00000548397 411 ntBASIC17.56■□□□□ 0.4
TRIM43Q96BQ3 FOS-206ENST00000555347 1280 ntTSL 2 BASIC17.56■□□□□ 0.4
TRIM43Q96BQ3 DUX4L45-201ENST00000566406 1057 ntBASIC17.56■□□□□ 0.4
TRIM43Q96BQ3 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC17.56■□□□□ 0.4
TRIM43Q96BQ3 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC17.56■□□□□ 0.4
TRIM43Q96BQ3 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC17.56■□□□□ 0.4
TRIM43Q96BQ3 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC17.56■□□□□ 0.4
TRIM43Q96BQ3 MIR4321-201ENST00000592276 80 ntBASIC17.56■□□□□ 0.4
TRIM43Q96BQ3 ATF5-205ENST00000600336 682 ntTSL 2 BASIC17.56■□□□□ 0.4
TRIM43Q96BQ3 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
TRIM43Q96BQ3 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC17.56■□□□□ 0.4
TRIM43Q96BQ3 HADH-212ENST00000638621 741 ntTSL 5 BASIC17.56■□□□□ 0.4
TRIM43Q96BQ3 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM43Q96BQ3 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.56■□□□□ 0.4
TRIM43Q96BQ3 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms