Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
RFT1Q96AA3 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
RFT1Q96AA3 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RFT1Q96AA3 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
RFT1Q96AA3 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.62□□□□□ -0.07
RFT1Q96AA3 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
RFT1Q96AA3 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.62□□□□□ -0.07
RFT1Q96AA3 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
RFT1Q96AA3 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RFT1Q96AA3 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
RFT1Q96AA3 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.62□□□□□ -0.07
RFT1Q96AA3 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RFT1Q96AA3 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
RFT1Q96AA3 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
RFT1Q96AA3 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC14.62□□□□□ -0.07
RFT1Q96AA3 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RFT1Q96AA3 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.62□□□□□ -0.07
RFT1Q96AA3 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
RFT1Q96AA3 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.62□□□□□ -0.07
RFT1Q96AA3 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RFT1Q96AA3 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
RFT1Q96AA3 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RFT1Q96AA3 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RFT1Q96AA3 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC14.62□□□□□ -0.07
RFT1Q96AA3 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC14.62□□□□□ -0.07
RFT1Q96AA3 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
RFT1Q96AA3 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
RFT1Q96AA3 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC14.62□□□□□ -0.07
RFT1Q96AA3 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RFT1Q96AA3 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC14.62□□□□□ -0.07
RFT1Q96AA3 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
RFT1Q96AA3 AC138894.3-201ENST00000603787 634 ntBASIC14.62□□□□□ -0.07
RFT1Q96AA3 AC069148.1-201ENST00000608741 768 ntBASIC14.62□□□□□ -0.07
RFT1Q96AA3 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
RFT1Q96AA3 AP000550.4-202ENST00000639755 178 ntBASIC14.62□□□□□ -0.07
RFT1Q96AA3 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
RFT1Q96AA3 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.62□□□□□ -0.07
RFT1Q96AA3 AP005117.1-202ENST00000581724 1908 ntBASIC14.62□□□□□ -0.07
RFT1Q96AA3 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.62□□□□□ -0.07
RFT1Q96AA3 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RFT1Q96AA3 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RFT1Q96AA3 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC14.62□□□□□ -0.07
RFT1Q96AA3 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
RFT1Q96AA3 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RFT1Q96AA3 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RFT1Q96AA3 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
RFT1Q96AA3 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RFT1Q96AA3 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RFT1Q96AA3 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
RFT1Q96AA3 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
RFT1Q96AA3 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
RFT1Q96AA3 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RFT1Q96AA3 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
RFT1Q96AA3 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.61□□□□□ -0.07
RFT1Q96AA3 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.61□□□□□ -0.07
RFT1Q96AA3 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.61□□□□□ -0.07
RFT1Q96AA3 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RFT1Q96AA3 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
RFT1Q96AA3 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
RFT1Q96AA3 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC14.61□□□□□ -0.07
RFT1Q96AA3 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
RFT1Q96AA3 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RFT1Q96AA3 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
RFT1Q96AA3 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RFT1Q96AA3 S100A2-206ENST00000497140 697 ntTSL 2 BASIC14.61□□□□□ -0.07
RFT1Q96AA3 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC14.61□□□□□ -0.07
RFT1Q96AA3 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC14.61□□□□□ -0.07
RFT1Q96AA3 COX5A-204ENST00000567270 579 ntTSL 3 BASIC14.61□□□□□ -0.07
RFT1Q96AA3 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RFT1Q96AA3 AP000867.4-201ENST00000641616 219 ntBASIC14.61□□□□□ -0.07
RFT1Q96AA3 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RFT1Q96AA3 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RFT1Q96AA3 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RFT1Q96AA3 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
RFT1Q96AA3 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
RFT1Q96AA3 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RFT1Q96AA3 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RFT1Q96AA3 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RFT1Q96AA3 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.61□□□□□ -0.07
RFT1Q96AA3 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RFT1Q96AA3 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
RFT1Q96AA3 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RFT1Q96AA3 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RFT1Q96AA3 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RFT1Q96AA3 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
RFT1Q96AA3 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC14.6□□□□□ -0.07
RFT1Q96AA3 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RFT1Q96AA3 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RFT1Q96AA3 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RFT1Q96AA3 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
RFT1Q96AA3 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RFT1Q96AA3 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
RFT1Q96AA3 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RFT1Q96AA3 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RFT1Q96AA3 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RFT1Q96AA3 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.6□□□□□ -0.07
RFT1Q96AA3 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RFT1Q96AA3 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RFT1Q96AA3 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RFT1Q96AA3 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms