Protein–RNA interactions for Protein: Q969W0

SPTSSA, Serine palmitoyltransferase small subunit A, humanhuman

Predictions only

Length 71 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSAQ969W0 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.42□□□□□ -0.1
SPTSSAQ969W0 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC14.42□□□□□ -0.1
SPTSSAQ969W0 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SPTSSAQ969W0 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPTSSAQ969W0 AL596087.1-201ENST00000400979 1969 ntBASIC14.42□□□□□ -0.1
SPTSSAQ969W0 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SPTSSAQ969W0 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SPTSSAQ969W0 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SPTSSAQ969W0 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SPTSSAQ969W0 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
SPTSSAQ969W0 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.41□□□□□ -0.1
SPTSSAQ969W0 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SPTSSAQ969W0 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SPTSSAQ969W0 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SPTSSAQ969W0 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SPTSSAQ969W0 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SPTSSAQ969W0 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SPTSSAQ969W0 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SPTSSAQ969W0 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SPTSSAQ969W0 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SPTSSAQ969W0 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SPTSSAQ969W0 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SPTSSAQ969W0 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SPTSSAQ969W0 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SPTSSAQ969W0 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SPTSSAQ969W0 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SPTSSAQ969W0 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC14.41□□□□□ -0.1
SPTSSAQ969W0 RHOQP3-201ENST00000437982 621 ntBASIC14.41□□□□□ -0.1
SPTSSAQ969W0 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SPTSSAQ969W0 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC14.41□□□□□ -0.1
SPTSSAQ969W0 NMU-203ENST00000507338 658 ntTSL 3 BASIC14.41□□□□□ -0.1
SPTSSAQ969W0 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC14.41□□□□□ -0.1
SPTSSAQ969W0 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC14.41□□□□□ -0.1
SPTSSAQ969W0 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
SPTSSAQ969W0 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC14.41□□□□□ -0.1
SPTSSAQ969W0 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SPTSSAQ969W0 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC14.41□□□□□ -0.1
SPTSSAQ969W0 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SPTSSAQ969W0 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
SPTSSAQ969W0 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.41□□□□□ -0.1
SPTSSAQ969W0 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
SPTSSAQ969W0 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
SPTSSAQ969W0 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SPTSSAQ969W0 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SPTSSAQ969W0 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SPTSSAQ969W0 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SPTSSAQ969W0 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
SPTSSAQ969W0 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SPTSSAQ969W0 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SPTSSAQ969W0 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
SPTSSAQ969W0 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SPTSSAQ969W0 AC104109.2-201ENST00000602919 1418 ntBASIC14.41□□□□□ -0.1
SPTSSAQ969W0 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
SPTSSAQ969W0 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SPTSSAQ969W0 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SPTSSAQ969W0 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
SPTSSAQ969W0 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
SPTSSAQ969W0 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SPTSSAQ969W0 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SPTSSAQ969W0 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SPTSSAQ969W0 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
SPTSSAQ969W0 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
SPTSSAQ969W0 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC14.4□□□□□ -0.1
SPTSSAQ969W0 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SPTSSAQ969W0 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
SPTSSAQ969W0 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
SPTSSAQ969W0 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SPTSSAQ969W0 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
SPTSSAQ969W0 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SPTSSAQ969W0 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC14.4□□□□□ -0.1
SPTSSAQ969W0 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC14.4□□□□□ -0.1
SPTSSAQ969W0 CRCP-205ENST00000431089 942 ntTSL 2 BASIC14.4□□□□□ -0.1
SPTSSAQ969W0 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC14.4□□□□□ -0.1
SPTSSAQ969W0 RPL28-209ENST00000560055 670 ntTSL 3 BASIC14.4□□□□□ -0.1
SPTSSAQ969W0 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC14.4□□□□□ -0.1
SPTSSAQ969W0 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC14.4□□□□□ -0.1
SPTSSAQ969W0 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC14.4□□□□□ -0.1
SPTSSAQ969W0 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC14.4□□□□□ -0.1
SPTSSAQ969W0 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC14.4□□□□□ -0.1
SPTSSAQ969W0 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
SPTSSAQ969W0 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC14.4□□□□□ -0.1
SPTSSAQ969W0 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
SPTSSAQ969W0 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.4□□□□□ -0.1
SPTSSAQ969W0 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.4□□□□□ -0.1
SPTSSAQ969W0 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.4□□□□□ -0.1
SPTSSAQ969W0 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SPTSSAQ969W0 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
SPTSSAQ969W0 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SPTSSAQ969W0 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SPTSSAQ969W0 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SPTSSAQ969W0 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
SPTSSAQ969W0 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC14.4□□□□□ -0.1
SPTSSAQ969W0 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.4□□□□□ -0.1
SPTSSAQ969W0 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SPTSSAQ969W0 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SPTSSAQ969W0 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SPTSSAQ969W0 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
SPTSSAQ969W0 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.39□□□□□ -0.11
SPTSSAQ969W0 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SPTSSAQ969W0 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 143.2 ms