Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SHC3Q92529 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.47■□□□□ 0.39
SHC3Q92529 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SHC3Q92529 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.47■□□□□ 0.39
SHC3Q92529 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.47■□□□□ 0.39
SHC3Q92529 AL671277.1-201ENST00000429656 993 ntBASIC17.47■□□□□ 0.39
SHC3Q92529 AP000347.1-202ENST00000435868 847 ntBASIC17.47■□□□□ 0.39
SHC3Q92529 AC245100.5-201ENST00000452108 331 ntBASIC17.47■□□□□ 0.39
SHC3Q92529 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.47■□□□□ 0.39
SHC3Q92529 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.47■□□□□ 0.39
SHC3Q92529 AL135744.1-201ENST00000565098 629 ntBASIC17.47■□□□□ 0.39
SHC3Q92529 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.47■□□□□ 0.39
SHC3Q92529 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.47■□□□□ 0.39
SHC3Q92529 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.47■□□□□ 0.39
SHC3Q92529 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SHC3Q92529 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SHC3Q92529 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SHC3Q92529 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SHC3Q92529 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SHC3Q92529 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SHC3Q92529 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
SHC3Q92529 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SHC3Q92529 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SHC3Q92529 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SHC3Q92529 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SHC3Q92529 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.47■□□□□ 0.39
SHC3Q92529 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SHC3Q92529 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SHC3Q92529 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
SHC3Q92529 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SHC3Q92529 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SHC3Q92529 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
SHC3Q92529 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
SHC3Q92529 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.46■□□□□ 0.39
SHC3Q92529 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.46■□□□□ 0.39
SHC3Q92529 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SHC3Q92529 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
SHC3Q92529 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17.46■□□□□ 0.39
SHC3Q92529 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SHC3Q92529 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
SHC3Q92529 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.46■□□□□ 0.39
SHC3Q92529 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
SHC3Q92529 TFAMP1-201ENST00000412727 736 ntBASIC17.46■□□□□ 0.39
SHC3Q92529 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SHC3Q92529 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC17.46■□□□□ 0.39
SHC3Q92529 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.46■□□□□ 0.39
SHC3Q92529 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.46■□□□□ 0.39
SHC3Q92529 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
SHC3Q92529 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.46■□□□□ 0.39
SHC3Q92529 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
SHC3Q92529 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
SHC3Q92529 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
SHC3Q92529 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.46■□□□□ 0.38
SHC3Q92529 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SHC3Q92529 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC17.45■□□□□ 0.38
SHC3Q92529 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
SHC3Q92529 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SHC3Q92529 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.45■□□□□ 0.38
SHC3Q92529 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SHC3Q92529 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SHC3Q92529 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SHC3Q92529 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SHC3Q92529 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SHC3Q92529 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SHC3Q92529 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SHC3Q92529 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SHC3Q92529 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SHC3Q92529 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17.45■□□□□ 0.38
SHC3Q92529 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
SHC3Q92529 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
SHC3Q92529 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SHC3Q92529 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SHC3Q92529 YBX2P1-201ENST00000394192 760 ntBASIC17.45■□□□□ 0.38
SHC3Q92529 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.45■□□□□ 0.38
SHC3Q92529 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.45■□□□□ 0.38
SHC3Q92529 FAM86C2P-203ENST00000528684 1004 ntBASIC17.45■□□□□ 0.38
SHC3Q92529 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.45■□□□□ 0.38
SHC3Q92529 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.45■□□□□ 0.38
SHC3Q92529 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.45■□□□□ 0.38
SHC3Q92529 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.45■□□□□ 0.38
SHC3Q92529 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.45■□□□□ 0.38
SHC3Q92529 MIR4321-201ENST00000592276 80 ntBASIC17.45■□□□□ 0.38
SHC3Q92529 C20orf181-201ENST00000623918 480 ntBASIC17.45■□□□□ 0.38
SHC3Q92529 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
SHC3Q92529 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.45■□□□□ 0.38
SHC3Q92529 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC17.45■□□□□ 0.38
SHC3Q92529 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.45■□□□□ 0.38
SHC3Q92529 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SHC3Q92529 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SHC3Q92529 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SHC3Q92529 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SHC3Q92529 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SHC3Q92529 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
SHC3Q92529 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SHC3Q92529 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SHC3Q92529 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SHC3Q92529 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SHC3Q92529 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SHC3Q92529 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SHC3Q92529 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms