Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC15.06■□□□□ 0
CNIH3Q8TBE1 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.06■□□□□ 0
CNIH3Q8TBE1 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
CNIH3Q8TBE1 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.06■□□□□ 0
CNIH3Q8TBE1 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
CNIH3Q8TBE1 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CNIH3Q8TBE1 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.06■□□□□ 0
CNIH3Q8TBE1 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.06■□□□□ 0
CNIH3Q8TBE1 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.05■□□□□ 0
CNIH3Q8TBE1 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CNIH3Q8TBE1 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CNIH3Q8TBE1 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
CNIH3Q8TBE1 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
CNIH3Q8TBE1 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.05■□□□□ 0
CNIH3Q8TBE1 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CNIH3Q8TBE1 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.05■□□□□ 0
CNIH3Q8TBE1 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.05■□□□□ 0
CNIH3Q8TBE1 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.05■□□□□ 0
CNIH3Q8TBE1 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
CNIH3Q8TBE1 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
CNIH3Q8TBE1 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.05■□□□□ -0
CNIH3Q8TBE1 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CNIH3Q8TBE1 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
CNIH3Q8TBE1 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.05■□□□□ -0
CNIH3Q8TBE1 MIR648-201ENST00000385046 94 ntBASIC15.05■□□□□ -0
CNIH3Q8TBE1 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC15.05■□□□□ -0
CNIH3Q8TBE1 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.05■□□□□ -0
CNIH3Q8TBE1 AC117947.1-201ENST00000427448 529 ntBASIC15.05■□□□□ -0
CNIH3Q8TBE1 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC15.05■□□□□ -0
CNIH3Q8TBE1 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC15.05■□□□□ -0
CNIH3Q8TBE1 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC15.05■□□□□ -0
CNIH3Q8TBE1 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.05■□□□□ -0
CNIH3Q8TBE1 AC097493.4-201ENST00000641197 219 ntBASIC15.05■□□□□ -0
CNIH3Q8TBE1 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC15.05■□□□□ -0
CNIH3Q8TBE1 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC15.05■□□□□ -0
CNIH3Q8TBE1 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CNIH3Q8TBE1 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
CNIH3Q8TBE1 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC15.05■□□□□ -0
CNIH3Q8TBE1 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
CNIH3Q8TBE1 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.05■□□□□ -0
CNIH3Q8TBE1 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.05■□□□□ -0
CNIH3Q8TBE1 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.05■□□□□ -0
CNIH3Q8TBE1 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CNIH3Q8TBE1 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
CNIH3Q8TBE1 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.05■□□□□ -0
CNIH3Q8TBE1 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.05■□□□□ -0
CNIH3Q8TBE1 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.05■□□□□ -0
CNIH3Q8TBE1 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CNIH3Q8TBE1 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.05■□□□□ -0
CNIH3Q8TBE1 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CNIH3Q8TBE1 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
CNIH3Q8TBE1 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.05■□□□□ -0
CNIH3Q8TBE1 FLJ16779-201ENST00000612722 7638 ntBASIC15.04■□□□□ -0
CNIH3Q8TBE1 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CNIH3Q8TBE1 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CNIH3Q8TBE1 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.04■□□□□ -0
CNIH3Q8TBE1 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
CNIH3Q8TBE1 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.04■□□□□ -0
CNIH3Q8TBE1 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.04■□□□□ -0
CNIH3Q8TBE1 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.04■□□□□ -0
CNIH3Q8TBE1 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.04■□□□□ -0
CNIH3Q8TBE1 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
CNIH3Q8TBE1 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
CNIH3Q8TBE1 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
CNIH3Q8TBE1 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CNIH3Q8TBE1 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.04■□□□□ -0
CNIH3Q8TBE1 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.04■□□□□ -0
CNIH3Q8TBE1 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.04■□□□□ -0
CNIH3Q8TBE1 AC092919.2-201ENST00000623631 1645 ntBASIC15.04■□□□□ -0
CNIH3Q8TBE1 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CNIH3Q8TBE1 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CNIH3Q8TBE1 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.04■□□□□ -0
CNIH3Q8TBE1 TERF1P1-201ENST00000311003 1181 ntBASIC15.04■□□□□ -0
CNIH3Q8TBE1 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC15.04■□□□□ -0
CNIH3Q8TBE1 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC15.04■□□□□ -0
CNIH3Q8TBE1 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC15.04■□□□□ -0
CNIH3Q8TBE1 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CNIH3Q8TBE1 MIR4492-201ENST00000581627 80 ntBASIC15.04■□□□□ -0
CNIH3Q8TBE1 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC15.04■□□□□ -0
CNIH3Q8TBE1 AC010654.1-201ENST00000615722 808 ntBASIC15.04■□□□□ -0
CNIH3Q8TBE1 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
CNIH3Q8TBE1 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
CNIH3Q8TBE1 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.04■□□□□ -0
CNIH3Q8TBE1 AC026748.1-201ENST00000624349 3251 ntBASIC15.04■□□□□ -0
CNIH3Q8TBE1 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CNIH3Q8TBE1 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
CNIH3Q8TBE1 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.04■□□□□ -0
CNIH3Q8TBE1 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.04■□□□□ -0
CNIH3Q8TBE1 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.04■□□□□ -0
CNIH3Q8TBE1 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.04■□□□□ -0
CNIH3Q8TBE1 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.04■□□□□ -0
CNIH3Q8TBE1 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.04■□□□□ -0
CNIH3Q8TBE1 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CNIH3Q8TBE1 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CNIH3Q8TBE1 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.03■□□□□ -0
CNIH3Q8TBE1 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CNIH3Q8TBE1 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CNIH3Q8TBE1 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CNIH3Q8TBE1 TMBIM7P-203ENST00000641617 1718 ntBASIC15.03■□□□□ -0
CNIH3Q8TBE1 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms