Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
COL22A1Q8NFW1 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
COL22A1Q8NFW1 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
COL22A1Q8NFW1 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
COL22A1Q8NFW1 FNTAP2-201ENST00000430308 634 ntBASIC21.4■■□□□ 1.02
COL22A1Q8NFW1 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
COL22A1Q8NFW1 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC21.4■■□□□ 1.02
COL22A1Q8NFW1 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC21.4■■□□□ 1.02
COL22A1Q8NFW1 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC21.4■■□□□ 1.02
COL22A1Q8NFW1 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC21.4■■□□□ 1.02
COL22A1Q8NFW1 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
COL22A1Q8NFW1 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
COL22A1Q8NFW1 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC21.4■■□□□ 1.02
COL22A1Q8NFW1 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
COL22A1Q8NFW1 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
COL22A1Q8NFW1 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
COL22A1Q8NFW1 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC21.4■■□□□ 1.02
COL22A1Q8NFW1 AC136604.1-201ENST00000418535 575 ntBASIC21.4■■□□□ 1.02
COL22A1Q8NFW1 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
COL22A1Q8NFW1 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
COL22A1Q8NFW1 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC21.4■■□□□ 1.02
COL22A1Q8NFW1 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC21.4■■□□□ 1.02
COL22A1Q8NFW1 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC21.4■■□□□ 1.02
COL22A1Q8NFW1 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
COL22A1Q8NFW1 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
COL22A1Q8NFW1 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.02
COL22A1Q8NFW1 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
COL22A1Q8NFW1 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
COL22A1Q8NFW1 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
COL22A1Q8NFW1 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.02
COL22A1Q8NFW1 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
COL22A1Q8NFW1 AL121723.1-201ENST00000445194 1519 ntBASIC21.39■■□□□ 1.02
COL22A1Q8NFW1 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC21.39■■□□□ 1.02
COL22A1Q8NFW1 AC008764.6-201ENST00000595909 2069 ntBASIC21.39■■□□□ 1.01
COL22A1Q8NFW1 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
COL22A1Q8NFW1 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC21.39■■□□□ 1.01
COL22A1Q8NFW1 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
COL22A1Q8NFW1 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC21.39■■□□□ 1.01
COL22A1Q8NFW1 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
COL22A1Q8NFW1 KRTAP19-9P-201ENST00000421795 191 ntBASIC21.39■■□□□ 1.01
COL22A1Q8NFW1 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC21.39■■□□□ 1.01
COL22A1Q8NFW1 FTLP10-202ENST00000505798 471 ntBASIC21.39■■□□□ 1.01
COL22A1Q8NFW1 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.01
COL22A1Q8NFW1 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC21.39■■□□□ 1.01
COL22A1Q8NFW1 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC21.39■■□□□ 1.01
COL22A1Q8NFW1 AC093813.1-201ENST00000605066 256 ntBASIC21.39■■□□□ 1.01
COL22A1Q8NFW1 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC21.39■■□□□ 1.01
COL22A1Q8NFW1 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
COL22A1Q8NFW1 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
COL22A1Q8NFW1 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC21.39■■□□□ 1.01
COL22A1Q8NFW1 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
COL22A1Q8NFW1 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
COL22A1Q8NFW1 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC21.39■■□□□ 1.01
COL22A1Q8NFW1 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC21.39■■□□□ 1.01
COL22A1Q8NFW1 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
COL22A1Q8NFW1 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
COL22A1Q8NFW1 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
COL22A1Q8NFW1 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
COL22A1Q8NFW1 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC21.39■■□□□ 1.01
COL22A1Q8NFW1 DRD5P1-201ENST00000456605 1438 ntBASIC21.38■■□□□ 1.01
COL22A1Q8NFW1 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
COL22A1Q8NFW1 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC21.38■■□□□ 1.01
COL22A1Q8NFW1 AC135050.7-201ENST00000624508 2218 ntBASIC21.38■■□□□ 1.01
COL22A1Q8NFW1 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
COL22A1Q8NFW1 AL645728.1-201ENST00000366221 2101 ntBASIC21.38■■□□□ 1.01
COL22A1Q8NFW1 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
COL22A1Q8NFW1 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
COL22A1Q8NFW1 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
COL22A1Q8NFW1 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
COL22A1Q8NFW1 ACKR1-201ENST00000368121 1240 ntBASIC21.38■■□□□ 1.01
COL22A1Q8NFW1 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
COL22A1Q8NFW1 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
COL22A1Q8NFW1 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
COL22A1Q8NFW1 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC21.38■■□□□ 1.01
COL22A1Q8NFW1 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC21.38■■□□□ 1.01
COL22A1Q8NFW1 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC21.38■■□□□ 1.01
COL22A1Q8NFW1 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC21.38■■□□□ 1.01
COL22A1Q8NFW1 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC21.38■■□□□ 1.01
COL22A1Q8NFW1 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC21.38■■□□□ 1.01
COL22A1Q8NFW1 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC21.38■■□□□ 1.01
COL22A1Q8NFW1 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC21.38■■□□□ 1.01
COL22A1Q8NFW1 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC21.38■■□□□ 1.01
COL22A1Q8NFW1 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
COL22A1Q8NFW1 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
COL22A1Q8NFW1 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC21.38■■□□□ 1.01
COL22A1Q8NFW1 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
COL22A1Q8NFW1 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC21.37■■□□□ 1.01
COL22A1Q8NFW1 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
COL22A1Q8NFW1 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
COL22A1Q8NFW1 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
COL22A1Q8NFW1 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC21.37■■□□□ 1.01
COL22A1Q8NFW1 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
COL22A1Q8NFW1 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
COL22A1Q8NFW1 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
COL22A1Q8NFW1 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC21.37■■□□□ 1.01
COL22A1Q8NFW1 AC016700.1-201ENST00000429424 312 ntBASIC21.37■■□□□ 1.01
COL22A1Q8NFW1 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC21.37■■□□□ 1.01
COL22A1Q8NFW1 POM121L10P-201ENST00000436994 1285 ntBASIC21.37■■□□□ 1.01
COL22A1Q8NFW1 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC21.37■■□□□ 1.01
COL22A1Q8NFW1 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC21.37■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms