Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC18.93■□□□□ 0.62
CCDC148Q8NFR7 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC148Q8NFR7 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC18.93■□□□□ 0.62
CCDC148Q8NFR7 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC148Q8NFR7 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC18.93■□□□□ 0.62
CCDC148Q8NFR7 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC18.93■□□□□ 0.62
CCDC148Q8NFR7 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC148Q8NFR7 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
CCDC148Q8NFR7 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC18.93■□□□□ 0.62
CCDC148Q8NFR7 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC148Q8NFR7 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC148Q8NFR7 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC148Q8NFR7 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC18.92■□□□□ 0.62
CCDC148Q8NFR7 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC148Q8NFR7 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC148Q8NFR7 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
CCDC148Q8NFR7 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC18.92■□□□□ 0.62
CCDC148Q8NFR7 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC18.92■□□□□ 0.62
CCDC148Q8NFR7 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC148Q8NFR7 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC18.92■□□□□ 0.62
CCDC148Q8NFR7 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC148Q8NFR7 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC18.92■□□□□ 0.62
CCDC148Q8NFR7 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC18.92■□□□□ 0.62
CCDC148Q8NFR7 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC148Q8NFR7 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC18.92■□□□□ 0.62
CCDC148Q8NFR7 AC105339.1-204ENST00000636249 355 ntBASIC18.92■□□□□ 0.62
CCDC148Q8NFR7 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC148Q8NFR7 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC148Q8NFR7 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC148Q8NFR7 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC148Q8NFR7 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC148Q8NFR7 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC18.92■□□□□ 0.62
CCDC148Q8NFR7 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC148Q8NFR7 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC148Q8NFR7 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
CCDC148Q8NFR7 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC148Q8NFR7 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC148Q8NFR7 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC148Q8NFR7 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC148Q8NFR7 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC148Q8NFR7 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC148Q8NFR7 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
CCDC148Q8NFR7 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC18.91■□□□□ 0.62
CCDC148Q8NFR7 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC148Q8NFR7 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC18.91■□□□□ 0.62
CCDC148Q8NFR7 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CCDC148Q8NFR7 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC148Q8NFR7 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC148Q8NFR7 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC148Q8NFR7 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC148Q8NFR7 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC148Q8NFR7 U82695.1-201ENST00000635752 1889 ntBASIC18.91■□□□□ 0.62
CCDC148Q8NFR7 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC148Q8NFR7 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC148Q8NFR7 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC148Q8NFR7 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC18.91■□□□□ 0.62
CCDC148Q8NFR7 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC18.91■□□□□ 0.62
CCDC148Q8NFR7 AP000344.2-201ENST00000512987 629 ntBASIC18.91■□□□□ 0.62
CCDC148Q8NFR7 IGHV3-62-201ENST00000520057 340 ntBASIC18.91■□□□□ 0.62
CCDC148Q8NFR7 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC18.91■□□□□ 0.62
CCDC148Q8NFR7 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC18.91■□□□□ 0.62
CCDC148Q8NFR7 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC18.91■□□□□ 0.62
CCDC148Q8NFR7 KRT8P23-201ENST00000560090 1207 ntBASIC18.91■□□□□ 0.62
CCDC148Q8NFR7 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC148Q8NFR7 AC027307.2-201ENST00000591252 911 ntBASIC18.91■□□□□ 0.62
CCDC148Q8NFR7 AC022145.2-201ENST00000598203 171 ntBASIC18.91■□□□□ 0.62
CCDC148Q8NFR7 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC18.91■□□□□ 0.62
CCDC148Q8NFR7 AL513210.1-201ENST00000629608 234 ntBASIC18.91■□□□□ 0.62
CCDC148Q8NFR7 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC18.91■□□□□ 0.62
CCDC148Q8NFR7 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC148Q8NFR7 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC148Q8NFR7 AC005622.1-201ENST00000636801 1703 ntBASIC18.91■□□□□ 0.62
CCDC148Q8NFR7 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC148Q8NFR7 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC148Q8NFR7 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC148Q8NFR7 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC148Q8NFR7 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC148Q8NFR7 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC148Q8NFR7 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC148Q8NFR7 PCDH8P1-201ENST00000428983 2773 ntBASIC18.9■□□□□ 0.62
CCDC148Q8NFR7 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC148Q8NFR7 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC148Q8NFR7 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC148Q8NFR7 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC148Q8NFR7 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC148Q8NFR7 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC148Q8NFR7 STOM-202ENST00000347359 870 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC148Q8NFR7 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC148Q8NFR7 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
CCDC148Q8NFR7 SPCS2P4-201ENST00000436160 681 ntBASIC18.9■□□□□ 0.62
CCDC148Q8NFR7 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC18.9■□□□□ 0.62
CCDC148Q8NFR7 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CCDC148Q8NFR7 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC148Q8NFR7 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC18.9■□□□□ 0.62
CCDC148Q8NFR7 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
CCDC148Q8NFR7 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC18.9■□□□□ 0.62
CCDC148Q8NFR7 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC18.9■□□□□ 0.62
CCDC148Q8NFR7 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC148Q8NFR7 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC18.9■□□□□ 0.62
CCDC148Q8NFR7 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms