Protein–RNA interactions for Protein: Q8NB78

KDM1B, Lysine-specific histone demethylase 1B, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1BQ8NB78 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
KDM1BQ8NB78 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.74■□□□□ 0.27
KDM1BQ8NB78 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KDM1BQ8NB78 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KDM1BQ8NB78 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
KDM1BQ8NB78 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
KDM1BQ8NB78 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
KDM1BQ8NB78 AL512652.2-201ENST00000625156 1716 ntBASIC16.74■□□□□ 0.27
KDM1BQ8NB78 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KDM1BQ8NB78 AP3S2-216ENST00000617003 1561 ntBASIC16.74■□□□□ 0.27
KDM1BQ8NB78 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.74■□□□□ 0.27
KDM1BQ8NB78 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.74■□□□□ 0.27
KDM1BQ8NB78 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
KDM1BQ8NB78 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
KDM1BQ8NB78 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
KDM1BQ8NB78 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
KDM1BQ8NB78 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.74■□□□□ 0.27
KDM1BQ8NB78 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
KDM1BQ8NB78 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.74■□□□□ 0.27
KDM1BQ8NB78 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KDM1BQ8NB78 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.74■□□□□ 0.27
KDM1BQ8NB78 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.74■□□□□ 0.27
KDM1BQ8NB78 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.74■□□□□ 0.27
KDM1BQ8NB78 DUX4L27-201ENST00000554796 1261 ntBASIC16.74■□□□□ 0.27
KDM1BQ8NB78 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
KDM1BQ8NB78 MIR6080-201ENST00000617359 66 ntBASIC16.74■□□□□ 0.27
KDM1BQ8NB78 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
KDM1BQ8NB78 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KDM1BQ8NB78 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
KDM1BQ8NB78 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.74■□□□□ 0.27
KDM1BQ8NB78 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KDM1BQ8NB78 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KDM1BQ8NB78 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
KDM1BQ8NB78 FOXO1B-201ENST00000504678 1527 ntBASIC16.74■□□□□ 0.27
KDM1BQ8NB78 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
KDM1BQ8NB78 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
KDM1BQ8NB78 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KDM1BQ8NB78 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KDM1BQ8NB78 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KDM1BQ8NB78 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
KDM1BQ8NB78 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.74■□□□□ 0.27
KDM1BQ8NB78 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
KDM1BQ8NB78 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
KDM1BQ8NB78 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KDM1BQ8NB78 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
KDM1BQ8NB78 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
KDM1BQ8NB78 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
KDM1BQ8NB78 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
KDM1BQ8NB78 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
KDM1BQ8NB78 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
KDM1BQ8NB78 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.73■□□□□ 0.27
KDM1BQ8NB78 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
KDM1BQ8NB78 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.73■□□□□ 0.27
KDM1BQ8NB78 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.73■□□□□ 0.27
KDM1BQ8NB78 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
KDM1BQ8NB78 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
KDM1BQ8NB78 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC16.73■□□□□ 0.27
KDM1BQ8NB78 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.73■□□□□ 0.27
KDM1BQ8NB78 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC16.73■□□□□ 0.27
KDM1BQ8NB78 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.73■□□□□ 0.27
KDM1BQ8NB78 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC16.73■□□□□ 0.27
KDM1BQ8NB78 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
KDM1BQ8NB78 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.73■□□□□ 0.27
KDM1BQ8NB78 AC007967.4-201ENST00000614700 386 ntBASIC16.73■□□□□ 0.27
KDM1BQ8NB78 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC16.73■□□□□ 0.27
KDM1BQ8NB78 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.73■□□□□ 0.27
KDM1BQ8NB78 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
KDM1BQ8NB78 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
KDM1BQ8NB78 HLA-A-202ENST00000376806 1854 ntBASIC16.73■□□□□ 0.27
KDM1BQ8NB78 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
KDM1BQ8NB78 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.73■□□□□ 0.27
KDM1BQ8NB78 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
KDM1BQ8NB78 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
KDM1BQ8NB78 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
KDM1BQ8NB78 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.73■□□□□ 0.27
KDM1BQ8NB78 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
KDM1BQ8NB78 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
KDM1BQ8NB78 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.72■□□□□ 0.27
KDM1BQ8NB78 AC006538.1-201ENST00000567905 1585 ntBASIC16.72■□□□□ 0.27
KDM1BQ8NB78 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
KDM1BQ8NB78 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.72■□□□□ 0.27
KDM1BQ8NB78 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
KDM1BQ8NB78 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
KDM1BQ8NB78 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
KDM1BQ8NB78 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
KDM1BQ8NB78 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
KDM1BQ8NB78 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KDM1BQ8NB78 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KDM1BQ8NB78 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.72■□□□□ 0.27
KDM1BQ8NB78 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KDM1BQ8NB78 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.72■□□□□ 0.27
KDM1BQ8NB78 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
KDM1BQ8NB78 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.72■□□□□ 0.27
KDM1BQ8NB78 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KDM1BQ8NB78 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.72■□□□□ 0.27
KDM1BQ8NB78 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KDM1BQ8NB78 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.72■□□□□ 0.27
KDM1BQ8NB78 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
KDM1BQ8NB78 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.72■□□□□ 0.27
KDM1BQ8NB78 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms