Protein–RNA interactions for Protein: Q8N9R6

CDRT4, CMT1A duplicated region transcript 4 protein, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT4Q8N9R6 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDRT4Q8N9R6 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.26■□□□□ 0.03
CDRT4Q8N9R6 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDRT4Q8N9R6 FER1L4-210ENST00000615531 5998 ntBASIC15.26■□□□□ 0.03
CDRT4Q8N9R6 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDRT4Q8N9R6 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDRT4Q8N9R6 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CDRT4Q8N9R6 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CDRT4Q8N9R6 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDRT4Q8N9R6 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC15.26■□□□□ 0.03
CDRT4Q8N9R6 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC15.26■□□□□ 0.03
CDRT4Q8N9R6 RARRES2P8-201ENST00000566335 367 ntBASIC15.26■□□□□ 0.03
CDRT4Q8N9R6 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
CDRT4Q8N9R6 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDRT4Q8N9R6 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDRT4Q8N9R6 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDRT4Q8N9R6 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDRT4Q8N9R6 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDRT4Q8N9R6 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CDRT4Q8N9R6 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CDRT4Q8N9R6 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDRT4Q8N9R6 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDRT4Q8N9R6 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDRT4Q8N9R6 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDRT4Q8N9R6 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CDRT4Q8N9R6 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
CDRT4Q8N9R6 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CDRT4Q8N9R6 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
CDRT4Q8N9R6 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDRT4Q8N9R6 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
CDRT4Q8N9R6 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDRT4Q8N9R6 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDRT4Q8N9R6 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDRT4Q8N9R6 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDRT4Q8N9R6 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDRT4Q8N9R6 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDRT4Q8N9R6 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.25■□□□□ 0.03
CDRT4Q8N9R6 AC023274.1-201ENST00000418278 595 ntBASIC15.25■□□□□ 0.03
CDRT4Q8N9R6 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.25■□□□□ 0.03
CDRT4Q8N9R6 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDRT4Q8N9R6 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.25■□□□□ 0.03
CDRT4Q8N9R6 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDRT4Q8N9R6 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15.25■□□□□ 0.03
CDRT4Q8N9R6 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.25■□□□□ 0.03
CDRT4Q8N9R6 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.25■□□□□ 0.03
CDRT4Q8N9R6 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDRT4Q8N9R6 AC099522.2-201ENST00000607001 744 ntBASIC15.25■□□□□ 0.03
CDRT4Q8N9R6 AC073439.1-201ENST00000624121 1774 ntBASIC15.25■□□□□ 0.03
CDRT4Q8N9R6 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDRT4Q8N9R6 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDRT4Q8N9R6 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDRT4Q8N9R6 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
CDRT4Q8N9R6 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.25■□□□□ 0.03
CDRT4Q8N9R6 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDRT4Q8N9R6 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.25■□□□□ 0.03
CDRT4Q8N9R6 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDRT4Q8N9R6 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDRT4Q8N9R6 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.25■□□□□ 0.03
CDRT4Q8N9R6 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.25■□□□□ 0.03
CDRT4Q8N9R6 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
CDRT4Q8N9R6 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDRT4Q8N9R6 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
CDRT4Q8N9R6 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDRT4Q8N9R6 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDRT4Q8N9R6 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDRT4Q8N9R6 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CDRT4Q8N9R6 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDRT4Q8N9R6 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.24■□□□□ 0.03
CDRT4Q8N9R6 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CDRT4Q8N9R6 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDRT4Q8N9R6 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CDRT4Q8N9R6 AKAP8P1-201ENST00000434743 1349 ntBASIC15.24■□□□□ 0.03
CDRT4Q8N9R6 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDRT4Q8N9R6 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDRT4Q8N9R6 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.24■□□□□ 0.03
CDRT4Q8N9R6 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CDRT4Q8N9R6 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDRT4Q8N9R6 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDRT4Q8N9R6 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDRT4Q8N9R6 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDRT4Q8N9R6 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDRT4Q8N9R6 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDRT4Q8N9R6 MCCD1P2-201ENST00000423228 335 ntBASIC15.24■□□□□ 0.03
CDRT4Q8N9R6 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDRT4Q8N9R6 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDRT4Q8N9R6 PRYP6-201ENST00000514804 343 ntBASIC15.24■□□□□ 0.03
CDRT4Q8N9R6 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDRT4Q8N9R6 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC15.24■□□□□ 0.03
CDRT4Q8N9R6 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.24■□□□□ 0.03
CDRT4Q8N9R6 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDRT4Q8N9R6 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.24■□□□□ 0.03
CDRT4Q8N9R6 AC091812.2-201ENST00000619081 385 ntBASIC15.24■□□□□ 0.03
CDRT4Q8N9R6 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.24■□□□□ 0.03
CDRT4Q8N9R6 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDRT4Q8N9R6 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CDRT4Q8N9R6 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDRT4Q8N9R6 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC15.24■□□□□ 0.03
CDRT4Q8N9R6 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDRT4Q8N9R6 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDRT4Q8N9R6 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms