Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
LCA10Q71F78 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
LCA10Q71F78 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
LCA10Q71F78 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
LCA10Q71F78 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
LCA10Q71F78 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC8.92□□□□□ -0.98
LCA10Q71F78 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
LCA10Q71F78 FANCC-210ENST00000490972 2709 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
LCA10Q71F78 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC8.92□□□□□ -0.98
LCA10Q71F78 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
LCA10Q71F78 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
LCA10Q71F78 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
LCA10Q71F78 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC8.92□□□□□ -0.98
LCA10Q71F78 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC8.92□□□□□ -0.98
LCA10Q71F78 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC8.92□□□□□ -0.98
LCA10Q71F78 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
LCA10Q71F78 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC8.92□□□□□ -0.98
LCA10Q71F78 AL024508.2-201ENST00000607749 1894 ntBASIC8.92□□□□□ -0.98
LCA10Q71F78 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC8.92□□□□□ -0.98
LCA10Q71F78 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
LCA10Q71F78 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC8.92□□□□□ -0.98
LCA10Q71F78 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC8.92□□□□□ -0.98
LCA10Q71F78 ADM-208ENST00000534464 1640 ntTSL 2 BASIC8.92□□□□□ -0.98
LCA10Q71F78 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC8.92□□□□□ -0.98
LCA10Q71F78 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
LCA10Q71F78 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC8.92□□□□□ -0.98
LCA10Q71F78 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC8.92□□□□□ -0.98
LCA10Q71F78 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
LCA10Q71F78 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
LCA10Q71F78 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC8.92□□□□□ -0.98
LCA10Q71F78 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
LCA10Q71F78 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
LCA10Q71F78 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
LCA10Q71F78 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
LCA10Q71F78 KRT18P29-201ENST00000397031 1267 ntBASIC8.92□□□□□ -0.98
LCA10Q71F78 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC8.92□□□□□ -0.98
LCA10Q71F78 FAM201B-201ENST00000458407 597 ntBASIC8.92□□□□□ -0.98
LCA10Q71F78 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC8.92□□□□□ -0.98
LCA10Q71F78 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC8.92□□□□□ -0.98
LCA10Q71F78 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC8.92□□□□□ -0.98
LCA10Q71F78 AP001412.1-201ENST00000608405 714 ntBASIC8.92□□□□□ -0.98
LCA10Q71F78 CR769767.2-201ENST00000622735 460 ntBASIC8.92□□□□□ -0.98
LCA10Q71F78 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
LCA10Q71F78 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
LCA10Q71F78 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC8.92□□□□□ -0.98
LCA10Q71F78 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC8.92□□□□□ -0.98
LCA10Q71F78 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
LCA10Q71F78 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
LCA10Q71F78 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
LCA10Q71F78 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC8.92□□□□□ -0.98
LCA10Q71F78 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
LCA10Q71F78 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
LCA10Q71F78 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
LCA10Q71F78 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
LCA10Q71F78 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
LCA10Q71F78 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
LCA10Q71F78 LOXL4-201ENST00000260702 3653 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
LCA10Q71F78 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
LCA10Q71F78 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC8.92□□□□□ -0.98
LCA10Q71F78 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
LCA10Q71F78 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
LCA10Q71F78 DMBT1P1-203ENST00000636837 4628 ntBASIC8.92□□□□□ -0.98
LCA10Q71F78 AC097637.2-201ENST00000624096 1997 ntBASIC8.92□□□□□ -0.98
LCA10Q71F78 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
LCA10Q71F78 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC8.91□□□□□ -0.98
LCA10Q71F78 AMT-206ENST00000458307 1860 ntTSL 2 BASIC8.91□□□□□ -0.98
LCA10Q71F78 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC8.91□□□□□ -0.98
LCA10Q71F78 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
LCA10Q71F78 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC8.91□□□□□ -0.98
LCA10Q71F78 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC8.91□□□□□ -0.98
LCA10Q71F78 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
LCA10Q71F78 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC8.91□□□□□ -0.98
LCA10Q71F78 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC8.91□□□□□ -0.98
LCA10Q71F78 PIM1-201ENST00000373509 2650 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
LCA10Q71F78 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC8.91□□□□□ -0.98
LCA10Q71F78 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
LCA10Q71F78 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
LCA10Q71F78 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
LCA10Q71F78 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
LCA10Q71F78 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
LCA10Q71F78 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
LCA10Q71F78 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
LCA10Q71F78 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
LCA10Q71F78 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
LCA10Q71F78 AC006504.5-208ENST00000588784 2401 ntBASIC8.91□□□□□ -0.98
LCA10Q71F78 DNM1P41-201ENST00000623634 3350 ntBASIC8.91□□□□□ -0.98
LCA10Q71F78 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC8.91□□□□□ -0.98
LCA10Q71F78 PPT1-215ENST00000641471 2368 ntBASIC8.91□□□□□ -0.98
LCA10Q71F78 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
LCA10Q71F78 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
LCA10Q71F78 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
LCA10Q71F78 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC8.91□□□□□ -0.98
LCA10Q71F78 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
LCA10Q71F78 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC8.91□□□□□ -0.98
LCA10Q71F78 TCAF1P1-201ENST00000414990 2232 ntBASIC8.91□□□□□ -0.98
LCA10Q71F78 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC8.91□□□□□ -0.98
LCA10Q71F78 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
LCA10Q71F78 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC8.91□□□□□ -0.98
LCA10Q71F78 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
LCA10Q71F78 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC8.91□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms