Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC62Q6P9F0 RPS19-201ENST00000221975 500 ntTSL 3 BASIC18.39■□□□□ 0.53
CCDC62Q6P9F0 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
CCDC62Q6P9F0 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC62Q6P9F0 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC62Q6P9F0 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC62Q6P9F0 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC62Q6P9F0 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC62Q6P9F0 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
CCDC62Q6P9F0 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC18.39■□□□□ 0.53
CCDC62Q6P9F0 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC62Q6P9F0 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC62Q6P9F0 HLA-J-202ENST00000469281 1241 ntBASIC18.39■□□□□ 0.53
CCDC62Q6P9F0 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC18.39■□□□□ 0.53
CCDC62Q6P9F0 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC18.39■□□□□ 0.53
CCDC62Q6P9F0 NAA38-207ENST00000576861 556 ntTSL 3 BASIC18.39■□□□□ 0.53
CCDC62Q6P9F0 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC18.39■□□□□ 0.53
CCDC62Q6P9F0 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC18.39■□□□□ 0.53
CCDC62Q6P9F0 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
CCDC62Q6P9F0 CECR7-204ENST00000609932 568 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC62Q6P9F0 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
CCDC62Q6P9F0 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC62Q6P9F0 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CCDC62Q6P9F0 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.39■□□□□ 0.53
CCDC62Q6P9F0 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC62Q6P9F0 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC62Q6P9F0 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.39■□□□□ 0.53
CCDC62Q6P9F0 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC62Q6P9F0 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC62Q6P9F0 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
CCDC62Q6P9F0 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC62Q6P9F0 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CCDC62Q6P9F0 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CCDC62Q6P9F0 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC62Q6P9F0 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CCDC62Q6P9F0 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC62Q6P9F0 RELA-227ENST00000615805 2236 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC62Q6P9F0 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC62Q6P9F0 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CCDC62Q6P9F0 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC62Q6P9F0 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC62Q6P9F0 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC62Q6P9F0 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC62Q6P9F0 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
CCDC62Q6P9F0 GRAP-202ENST00000395635 834 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC62Q6P9F0 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC62Q6P9F0 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC18.38■□□□□ 0.53
CCDC62Q6P9F0 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CCDC62Q6P9F0 STOM-203ENST00000538954 1257 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC62Q6P9F0 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC18.38■□□□□ 0.53
CCDC62Q6P9F0 AC004233.3-201ENST00000607794 1269 ntBASIC18.38■□□□□ 0.53
CCDC62Q6P9F0 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC62Q6P9F0 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC62Q6P9F0 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC62Q6P9F0 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC62Q6P9F0 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC62Q6P9F0 AP001094.4-201ENST00000579008 2176 ntBASIC18.38■□□□□ 0.53
CCDC62Q6P9F0 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CCDC62Q6P9F0 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC62Q6P9F0 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC62Q6P9F0 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC62Q6P9F0 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CCDC62Q6P9F0 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC62Q6P9F0 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC62Q6P9F0 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC62Q6P9F0 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CCDC62Q6P9F0 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC62Q6P9F0 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC62Q6P9F0 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CCDC62Q6P9F0 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC62Q6P9F0 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC62Q6P9F0 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC62Q6P9F0 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.37■□□□□ 0.53
CCDC62Q6P9F0 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC62Q6P9F0 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC62Q6P9F0 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CCDC62Q6P9F0 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC62Q6P9F0 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC62Q6P9F0 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC62Q6P9F0 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC62Q6P9F0 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC62Q6P9F0 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CCDC62Q6P9F0 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC62Q6P9F0 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC62Q6P9F0 SPDYE17-201ENST00000412399 783 ntBASIC18.37■□□□□ 0.53
CCDC62Q6P9F0 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC18.37■□□□□ 0.53
CCDC62Q6P9F0 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC18.37■□□□□ 0.53
CCDC62Q6P9F0 AL512361.1-201ENST00000554200 418 ntBASIC18.37■□□□□ 0.53
CCDC62Q6P9F0 AL596325.1-201ENST00000563991 1082 ntBASIC18.37■□□□□ 0.53
CCDC62Q6P9F0 AC010336.2-201ENST00000564226 506 ntBASIC18.37■□□□□ 0.53
CCDC62Q6P9F0 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC62Q6P9F0 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC18.37■□□□□ 0.53
CCDC62Q6P9F0 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.37■□□□□ 0.53
CCDC62Q6P9F0 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC18.37■□□□□ 0.53
CCDC62Q6P9F0 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC62Q6P9F0 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CCDC62Q6P9F0 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC62Q6P9F0 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CCDC62Q6P9F0 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC18.37■□□□□ 0.53
CCDC62Q6P9F0 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms