Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LYSMD4Q5XG99 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LYSMD4Q5XG99 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
LYSMD4Q5XG99 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.97■□□□□ 0.15
LYSMD4Q5XG99 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC15.97■□□□□ 0.15
LYSMD4Q5XG99 BNIP3P42-201ENST00000454982 569 ntBASIC15.97■□□□□ 0.15
LYSMD4Q5XG99 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LYSMD4Q5XG99 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC15.97■□□□□ 0.15
LYSMD4Q5XG99 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC15.97■□□□□ 0.15
LYSMD4Q5XG99 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC15.97■□□□□ 0.15
LYSMD4Q5XG99 PAM16-204ENST00000571941 674 ntTSL 3 BASIC15.97■□□□□ 0.15
LYSMD4Q5XG99 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC15.97■□□□□ 0.15
LYSMD4Q5XG99 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.97■□□□□ 0.15
LYSMD4Q5XG99 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC15.97■□□□□ 0.15
LYSMD4Q5XG99 BNIP3P29-201ENST00000598302 571 ntBASIC15.97■□□□□ 0.15
LYSMD4Q5XG99 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
LYSMD4Q5XG99 AC011447.5-201ENST00000616168 564 ntBASIC15.97■□□□□ 0.15
LYSMD4Q5XG99 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC15.97■□□□□ 0.15
LYSMD4Q5XG99 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LYSMD4Q5XG99 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LYSMD4Q5XG99 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LYSMD4Q5XG99 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.97■□□□□ 0.15
LYSMD4Q5XG99 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.97■□□□□ 0.15
LYSMD4Q5XG99 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LYSMD4Q5XG99 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
LYSMD4Q5XG99 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LYSMD4Q5XG99 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC15.97■□□□□ 0.15
LYSMD4Q5XG99 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
LYSMD4Q5XG99 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LYSMD4Q5XG99 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LYSMD4Q5XG99 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.96■□□□□ 0.15
LYSMD4Q5XG99 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LYSMD4Q5XG99 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
LYSMD4Q5XG99 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LYSMD4Q5XG99 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LYSMD4Q5XG99 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LYSMD4Q5XG99 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LYSMD4Q5XG99 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LYSMD4Q5XG99 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC15.96■□□□□ 0.15
LYSMD4Q5XG99 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.96■□□□□ 0.15
LYSMD4Q5XG99 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC15.96■□□□□ 0.15
LYSMD4Q5XG99 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
LYSMD4Q5XG99 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC15.96■□□□□ 0.15
LYSMD4Q5XG99 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC15.96■□□□□ 0.15
LYSMD4Q5XG99 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.96■□□□□ 0.15
LYSMD4Q5XG99 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
LYSMD4Q5XG99 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC15.96■□□□□ 0.15
LYSMD4Q5XG99 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LYSMD4Q5XG99 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LYSMD4Q5XG99 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LYSMD4Q5XG99 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LYSMD4Q5XG99 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LYSMD4Q5XG99 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
LYSMD4Q5XG99 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
LYSMD4Q5XG99 AL645728.1-201ENST00000366221 2101 ntBASIC15.96■□□□□ 0.15
LYSMD4Q5XG99 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
LYSMD4Q5XG99 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
LYSMD4Q5XG99 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LYSMD4Q5XG99 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LYSMD4Q5XG99 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC15.96■□□□□ 0.15
LYSMD4Q5XG99 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC15.96■□□□□ 0.15
LYSMD4Q5XG99 PACS1-203ENST00000524815 628 ntTSL 4 BASIC15.96■□□□□ 0.15
LYSMD4Q5XG99 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC15.96■□□□□ 0.15
LYSMD4Q5XG99 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
LYSMD4Q5XG99 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC15.96■□□□□ 0.15
LYSMD4Q5XG99 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC15.96■□□□□ 0.15
LYSMD4Q5XG99 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC15.96■□□□□ 0.15
LYSMD4Q5XG99 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.96■□□□□ 0.15
LYSMD4Q5XG99 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
LYSMD4Q5XG99 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC15.96■□□□□ 0.15
LYSMD4Q5XG99 AL365330.1-201ENST00000607459 531 ntBASIC15.96■□□□□ 0.15
LYSMD4Q5XG99 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC15.96■□□□□ 0.15
LYSMD4Q5XG99 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
LYSMD4Q5XG99 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
LYSMD4Q5XG99 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
LYSMD4Q5XG99 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
LYSMD4Q5XG99 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LYSMD4Q5XG99 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
LYSMD4Q5XG99 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LYSMD4Q5XG99 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LYSMD4Q5XG99 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC15.96■□□□□ 0.14
LYSMD4Q5XG99 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
LYSMD4Q5XG99 CYP4F24P-201ENST00000586049 1580 ntBASIC15.96■□□□□ 0.14
LYSMD4Q5XG99 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
LYSMD4Q5XG99 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
LYSMD4Q5XG99 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LYSMD4Q5XG99 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LYSMD4Q5XG99 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LYSMD4Q5XG99 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
LYSMD4Q5XG99 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.95■□□□□ 0.14
LYSMD4Q5XG99 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.95■□□□□ 0.14
LYSMD4Q5XG99 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
LYSMD4Q5XG99 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
LYSMD4Q5XG99 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC15.95■□□□□ 0.14
LYSMD4Q5XG99 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
LYSMD4Q5XG99 GGT4P-201ENST00000623672 1708 ntBASIC15.95■□□□□ 0.14
LYSMD4Q5XG99 ANKRD19P-201ENST00000338192 862 ntBASIC15.95■□□□□ 0.14
LYSMD4Q5XG99 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
LYSMD4Q5XG99 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LYSMD4Q5XG99 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms