Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC20.36■□□□□ 0.85
RC3H1Q5TC82 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RC3H1Q5TC82 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
RC3H1Q5TC82 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
RC3H1Q5TC82 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
RC3H1Q5TC82 MGST3-203ENST00000367885 680 ntTSL 2 BASIC20.36■□□□□ 0.85
RC3H1Q5TC82 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC20.36■□□□□ 0.85
RC3H1Q5TC82 MPV17-206ENST00000402722 827 ntTSL 3 BASIC20.36■□□□□ 0.85
RC3H1Q5TC82 BCYRN1-201ENST00000418539 200 ntBASIC20.36■□□□□ 0.85
RC3H1Q5TC82 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC20.36■□□□□ 0.85
RC3H1Q5TC82 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RC3H1Q5TC82 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RC3H1Q5TC82 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC20.36■□□□□ 0.85
RC3H1Q5TC82 AC007551.1-201ENST00000457394 519 ntBASIC20.36■□□□□ 0.85
RC3H1Q5TC82 AC108725.1-201ENST00000495472 409 ntBASIC20.36■□□□□ 0.85
RC3H1Q5TC82 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RC3H1Q5TC82 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC20.36■□□□□ 0.85
RC3H1Q5TC82 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC20.36■□□□□ 0.85
RC3H1Q5TC82 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC20.36■□□□□ 0.85
RC3H1Q5TC82 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC20.36■□□□□ 0.85
RC3H1Q5TC82 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC20.36■□□□□ 0.85
RC3H1Q5TC82 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC20.36■□□□□ 0.85
RC3H1Q5TC82 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC20.36■□□□□ 0.85
RC3H1Q5TC82 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC20.36■□□□□ 0.85
RC3H1Q5TC82 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
RC3H1Q5TC82 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RC3H1Q5TC82 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC20.36■□□□□ 0.85
RC3H1Q5TC82 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RC3H1Q5TC82 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
RC3H1Q5TC82 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
RC3H1Q5TC82 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
RC3H1Q5TC82 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
RC3H1Q5TC82 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RC3H1Q5TC82 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
RC3H1Q5TC82 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RC3H1Q5TC82 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RC3H1Q5TC82 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RC3H1Q5TC82 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RC3H1Q5TC82 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RC3H1Q5TC82 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
RC3H1Q5TC82 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RC3H1Q5TC82 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC20.35■□□□□ 0.85
RC3H1Q5TC82 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC20.35■□□□□ 0.85
RC3H1Q5TC82 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC20.35■□□□□ 0.85
RC3H1Q5TC82 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
RC3H1Q5TC82 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RC3H1Q5TC82 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
RC3H1Q5TC82 RPL13AP25-201ENST00000484130 612 ntBASIC20.35■□□□□ 0.85
RC3H1Q5TC82 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC20.35■□□□□ 0.85
RC3H1Q5TC82 AGER-214ENST00000538695 487 ntTSL 2 BASIC20.35■□□□□ 0.85
RC3H1Q5TC82 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RC3H1Q5TC82 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC20.35■□□□□ 0.85
RC3H1Q5TC82 AC244093.1-201ENST00000610837 814 ntBASIC20.35■□□□□ 0.85
RC3H1Q5TC82 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RC3H1Q5TC82 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RC3H1Q5TC82 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RC3H1Q5TC82 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC20.35■□□□□ 0.85
RC3H1Q5TC82 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RC3H1Q5TC82 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RC3H1Q5TC82 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
RC3H1Q5TC82 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RC3H1Q5TC82 GRN-214ENST00000589265 1632 ntTSL 5 BASIC20.35■□□□□ 0.85
RC3H1Q5TC82 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RC3H1Q5TC82 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC20.34■□□□□ 0.85
RC3H1Q5TC82 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC20.34■□□□□ 0.85
RC3H1Q5TC82 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.34■□□□□ 0.85
RC3H1Q5TC82 INTS4P2-202ENST00000614726 2019 ntBASIC20.34■□□□□ 0.85
RC3H1Q5TC82 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
RC3H1Q5TC82 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC20.34■□□□□ 0.85
RC3H1Q5TC82 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RC3H1Q5TC82 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC20.34■□□□□ 0.85
RC3H1Q5TC82 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RC3H1Q5TC82 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
RC3H1Q5TC82 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC20.34■□□□□ 0.85
RC3H1Q5TC82 HAUS4P1-201ENST00000406739 1145 ntBASIC20.34■□□□□ 0.85
RC3H1Q5TC82 SOCS2P1-201ENST00000417727 557 ntBASIC20.34■□□□□ 0.85
RC3H1Q5TC82 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC20.34■□□□□ 0.85
RC3H1Q5TC82 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC20.34■□□□□ 0.85
RC3H1Q5TC82 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC20.34■□□□□ 0.85
RC3H1Q5TC82 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC20.34■□□□□ 0.85
RC3H1Q5TC82 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RC3H1Q5TC82 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC20.34■□□□□ 0.85
RC3H1Q5TC82 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
RC3H1Q5TC82 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RC3H1Q5TC82 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
RC3H1Q5TC82 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.34■□□□□ 0.85
RC3H1Q5TC82 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC20.34■□□□□ 0.85
RC3H1Q5TC82 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
RC3H1Q5TC82 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC20.34■□□□□ 0.85
RC3H1Q5TC82 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
RC3H1Q5TC82 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC20.34■□□□□ 0.85
RC3H1Q5TC82 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RC3H1Q5TC82 LETM1P2-201ENST00000597330 2178 ntBASIC20.34■□□□□ 0.85
RC3H1Q5TC82 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RC3H1Q5TC82 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
RC3H1Q5TC82 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RC3H1Q5TC82 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.33■□□□□ 0.85
RC3H1Q5TC82 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RC3H1Q5TC82 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
RC3H1Q5TC82 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms