Protein–RNA interactions for Protein: Q5JTY5

CBWD3, COBW domain-containing protein 3, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3Q5JTY5 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CBWD3Q5JTY5 TFAMP1-201ENST00000412727 736 ntBASIC17.71■□□□□ 0.43
CBWD3Q5JTY5 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.71■□□□□ 0.43
CBWD3Q5JTY5 AL671277.1-201ENST00000429656 993 ntBASIC17.71■□□□□ 0.43
CBWD3Q5JTY5 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.71■□□□□ 0.43
CBWD3Q5JTY5 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.71■□□□□ 0.43
CBWD3Q5JTY5 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.71■□□□□ 0.43
CBWD3Q5JTY5 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CBWD3Q5JTY5 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CBWD3Q5JTY5 FOXO1B-201ENST00000504678 1527 ntBASIC17.71■□□□□ 0.43
CBWD3Q5JTY5 AL589702.1-201ENST00000641229 1509 ntBASIC17.71■□□□□ 0.43
CBWD3Q5JTY5 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CBWD3Q5JTY5 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
CBWD3Q5JTY5 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.71■□□□□ 0.43
CBWD3Q5JTY5 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CBWD3Q5JTY5 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CBWD3Q5JTY5 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.42
CBWD3Q5JTY5 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.71■□□□□ 0.42
CBWD3Q5JTY5 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.7■□□□□ 0.42
CBWD3Q5JTY5 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CBWD3Q5JTY5 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CBWD3Q5JTY5 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17.7■□□□□ 0.42
CBWD3Q5JTY5 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CBWD3Q5JTY5 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.7■□□□□ 0.42
CBWD3Q5JTY5 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CBWD3Q5JTY5 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.7■□□□□ 0.42
CBWD3Q5JTY5 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CBWD3Q5JTY5 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CBWD3Q5JTY5 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CBWD3Q5JTY5 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.7■□□□□ 0.42
CBWD3Q5JTY5 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CBWD3Q5JTY5 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.7■□□□□ 0.42
CBWD3Q5JTY5 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.7■□□□□ 0.42
CBWD3Q5JTY5 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.7■□□□□ 0.42
CBWD3Q5JTY5 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CBWD3Q5JTY5 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.7■□□□□ 0.42
CBWD3Q5JTY5 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.7■□□□□ 0.42
CBWD3Q5JTY5 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.7■□□□□ 0.42
CBWD3Q5JTY5 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.7■□□□□ 0.42
CBWD3Q5JTY5 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.7■□□□□ 0.42
CBWD3Q5JTY5 C20orf181-201ENST00000623918 480 ntBASIC17.7■□□□□ 0.42
CBWD3Q5JTY5 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC17.7■□□□□ 0.42
CBWD3Q5JTY5 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.7■□□□□ 0.42
CBWD3Q5JTY5 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.7■□□□□ 0.42
CBWD3Q5JTY5 AC132872.4-202ENST00000622924 2756 ntBASIC17.7■□□□□ 0.42
CBWD3Q5JTY5 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.7■□□□□ 0.42
CBWD3Q5JTY5 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CBWD3Q5JTY5 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CBWD3Q5JTY5 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CBWD3Q5JTY5 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CBWD3Q5JTY5 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CBWD3Q5JTY5 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CBWD3Q5JTY5 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CBWD3Q5JTY5 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CBWD3Q5JTY5 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CBWD3Q5JTY5 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CBWD3Q5JTY5 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.69■□□□□ 0.42
CBWD3Q5JTY5 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
CBWD3Q5JTY5 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CBWD3Q5JTY5 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CBWD3Q5JTY5 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
CBWD3Q5JTY5 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.69■□□□□ 0.42
CBWD3Q5JTY5 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CBWD3Q5JTY5 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CBWD3Q5JTY5 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CBWD3Q5JTY5 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.69■□□□□ 0.42
CBWD3Q5JTY5 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
CBWD3Q5JTY5 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.69■□□□□ 0.42
CBWD3Q5JTY5 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CBWD3Q5JTY5 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CBWD3Q5JTY5 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CBWD3Q5JTY5 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CBWD3Q5JTY5 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CBWD3Q5JTY5 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
CBWD3Q5JTY5 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CBWD3Q5JTY5 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CBWD3Q5JTY5 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CBWD3Q5JTY5 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.69■□□□□ 0.42
CBWD3Q5JTY5 AC243562.1-201ENST00000560672 389 ntBASIC17.69■□□□□ 0.42
CBWD3Q5JTY5 AC073389.1-201ENST00000595595 795 ntBASIC17.69■□□□□ 0.42
CBWD3Q5JTY5 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.69■□□□□ 0.42
CBWD3Q5JTY5 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CBWD3Q5JTY5 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CBWD3Q5JTY5 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CBWD3Q5JTY5 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CBWD3Q5JTY5 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CBWD3Q5JTY5 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CBWD3Q5JTY5 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.69■□□□□ 0.42
CBWD3Q5JTY5 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.69■□□□□ 0.42
CBWD3Q5JTY5 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.69■□□□□ 0.42
CBWD3Q5JTY5 AKAP8P1-201ENST00000434743 1349 ntBASIC17.69■□□□□ 0.42
CBWD3Q5JTY5 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CBWD3Q5JTY5 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CBWD3Q5JTY5 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CBWD3Q5JTY5 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CBWD3Q5JTY5 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CBWD3Q5JTY5 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CBWD3Q5JTY5 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CBWD3Q5JTY5 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CBWD3Q5JTY5 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms