Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
HERC4Q5GLZ8 STOM-202ENST00000347359 870 ntTSL 2 BASIC18.36■□□□□ 0.53
HERC4Q5GLZ8 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HERC4Q5GLZ8 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HERC4Q5GLZ8 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HERC4Q5GLZ8 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC18.36■□□□□ 0.53
HERC4Q5GLZ8 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
HERC4Q5GLZ8 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC18.36■□□□□ 0.53
HERC4Q5GLZ8 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC18.36■□□□□ 0.53
HERC4Q5GLZ8 AC109635.5-201ENST00000533593 962 ntBASIC18.36■□□□□ 0.53
HERC4Q5GLZ8 AC025678.2-201ENST00000562061 970 ntBASIC18.36■□□□□ 0.53
HERC4Q5GLZ8 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC18.36■□□□□ 0.53
HERC4Q5GLZ8 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC18.36■□□□□ 0.53
HERC4Q5GLZ8 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
HERC4Q5GLZ8 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HERC4Q5GLZ8 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC18.36■□□□□ 0.53
HERC4Q5GLZ8 GOLGA6L17P-202ENST00000614358 1398 ntBASIC18.36■□□□□ 0.53
HERC4Q5GLZ8 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
HERC4Q5GLZ8 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
HERC4Q5GLZ8 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
HERC4Q5GLZ8 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HERC4Q5GLZ8 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
HERC4Q5GLZ8 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
HERC4Q5GLZ8 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
HERC4Q5GLZ8 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HERC4Q5GLZ8 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HERC4Q5GLZ8 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HERC4Q5GLZ8 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HERC4Q5GLZ8 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HERC4Q5GLZ8 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HERC4Q5GLZ8 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC18.35■□□□□ 0.53
HERC4Q5GLZ8 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
HERC4Q5GLZ8 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
HERC4Q5GLZ8 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HERC4Q5GLZ8 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC18.35■□□□□ 0.53
HERC4Q5GLZ8 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC18.35■□□□□ 0.53
HERC4Q5GLZ8 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
HERC4Q5GLZ8 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HERC4Q5GLZ8 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HERC4Q5GLZ8 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
HERC4Q5GLZ8 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HERC4Q5GLZ8 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
HERC4Q5GLZ8 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HERC4Q5GLZ8 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HERC4Q5GLZ8 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HERC4Q5GLZ8 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC18.35■□□□□ 0.53
HERC4Q5GLZ8 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC18.35■□□□□ 0.53
HERC4Q5GLZ8 AC069262.1-201ENST00000539058 672 ntBASIC18.35■□□□□ 0.53
HERC4Q5GLZ8 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC18.35■□□□□ 0.53
HERC4Q5GLZ8 AC004835.2-201ENST00000603762 682 ntBASIC18.35■□□□□ 0.53
HERC4Q5GLZ8 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC18.35■□□□□ 0.53
HERC4Q5GLZ8 AC068137.2-201ENST00000605408 478 ntBASIC18.35■□□□□ 0.53
HERC4Q5GLZ8 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC18.35■□□□□ 0.53
HERC4Q5GLZ8 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC18.35■□□□□ 0.53
HERC4Q5GLZ8 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HERC4Q5GLZ8 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HERC4Q5GLZ8 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HERC4Q5GLZ8 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HERC4Q5GLZ8 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC18.35■□□□□ 0.53
HERC4Q5GLZ8 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
HERC4Q5GLZ8 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
HERC4Q5GLZ8 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC18.35■□□□□ 0.53
HERC4Q5GLZ8 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HERC4Q5GLZ8 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HERC4Q5GLZ8 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HERC4Q5GLZ8 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
HERC4Q5GLZ8 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HERC4Q5GLZ8 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
HERC4Q5GLZ8 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HERC4Q5GLZ8 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC18.35■□□□□ 0.53
HERC4Q5GLZ8 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
HERC4Q5GLZ8 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC18.34■□□□□ 0.53
HERC4Q5GLZ8 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC18.34■□□□□ 0.53
HERC4Q5GLZ8 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HERC4Q5GLZ8 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HERC4Q5GLZ8 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HERC4Q5GLZ8 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HERC4Q5GLZ8 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HERC4Q5GLZ8 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
HERC4Q5GLZ8 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
HERC4Q5GLZ8 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC18.34■□□□□ 0.53
HERC4Q5GLZ8 KLK8-202ENST00000320838 456 ntTSL 5 BASIC18.34■□□□□ 0.53
HERC4Q5GLZ8 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HERC4Q5GLZ8 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HERC4Q5GLZ8 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC18.34■□□□□ 0.53
HERC4Q5GLZ8 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC18.34■□□□□ 0.53
HERC4Q5GLZ8 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC18.34■□□□□ 0.53
HERC4Q5GLZ8 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
HERC4Q5GLZ8 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
HERC4Q5GLZ8 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
HERC4Q5GLZ8 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC18.34■□□□□ 0.53
HERC4Q5GLZ8 DUT-210ENST00000559935 569 ntTSL 3 BASIC18.34■□□□□ 0.53
HERC4Q5GLZ8 AJ011932.1-201ENST00000621707 465 ntBASIC18.34■□□□□ 0.53
HERC4Q5GLZ8 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC18.34■□□□□ 0.53
HERC4Q5GLZ8 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
HERC4Q5GLZ8 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
HERC4Q5GLZ8 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HERC4Q5GLZ8 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC18.34■□□□□ 0.53
HERC4Q5GLZ8 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
HERC4Q5GLZ8 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms