Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
USH1GQ495M9 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC18.79■□□□□ 0.6
USH1GQ495M9 AC100757.3-201ENST00000622361 1406 ntBASIC18.79■□□□□ 0.6
USH1GQ495M9 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
USH1GQ495M9 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
USH1GQ495M9 LINC01144-201ENST00000626198 1710 ntBASIC18.79■□□□□ 0.6
USH1GQ495M9 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC18.79■□□□□ 0.6
USH1GQ495M9 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
USH1GQ495M9 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
USH1GQ495M9 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC18.79■□□□□ 0.6
USH1GQ495M9 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
USH1GQ495M9 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USH1GQ495M9 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC18.78■□□□□ 0.6
USH1GQ495M9 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC18.78■□□□□ 0.6
USH1GQ495M9 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
USH1GQ495M9 ALOX12P2-203ENST00000570921 1945 ntBASIC18.78■□□□□ 0.6
USH1GQ495M9 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC18.78■□□□□ 0.6
USH1GQ495M9 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
USH1GQ495M9 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USH1GQ495M9 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USH1GQ495M9 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
USH1GQ495M9 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
USH1GQ495M9 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
USH1GQ495M9 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
USH1GQ495M9 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
USH1GQ495M9 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USH1GQ495M9 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC18.78■□□□□ 0.6
USH1GQ495M9 AC241585.1-201ENST00000433527 519 ntBASIC18.78■□□□□ 0.6
USH1GQ495M9 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
USH1GQ495M9 LHX6-205ENST00000464484 666 ntTSL 2 BASIC18.78■□□□□ 0.6
USH1GQ495M9 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC18.78■□□□□ 0.6
USH1GQ495M9 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC18.78■□□□□ 0.6
USH1GQ495M9 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC18.78■□□□□ 0.6
USH1GQ495M9 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC18.78■□□□□ 0.6
USH1GQ495M9 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC18.78■□□□□ 0.6
USH1GQ495M9 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
USH1GQ495M9 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC18.78■□□□□ 0.6
USH1GQ495M9 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
USH1GQ495M9 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USH1GQ495M9 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USH1GQ495M9 GRAMD4P3-201ENST00000621665 1669 ntBASIC18.78■□□□□ 0.6
USH1GQ495M9 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
USH1GQ495M9 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
USH1GQ495M9 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC18.78■□□□□ 0.6
USH1GQ495M9 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC18.78■□□□□ 0.6
USH1GQ495M9 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC18.78■□□□□ 0.6
USH1GQ495M9 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USH1GQ495M9 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.78■□□□□ 0.6
USH1GQ495M9 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC18.78■□□□□ 0.6
USH1GQ495M9 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
USH1GQ495M9 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
USH1GQ495M9 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USH1GQ495M9 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
USH1GQ495M9 ACE-204ENST00000428043 5120 ntTSL 2 BASIC18.78■□□□□ 0.6
USH1GQ495M9 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC18.77■□□□□ 0.6
USH1GQ495M9 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
USH1GQ495M9 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
USH1GQ495M9 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.77■□□□□ 0.6
USH1GQ495M9 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
USH1GQ495M9 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC18.77■□□□□ 0.6
USH1GQ495M9 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC18.77■□□□□ 0.6
USH1GQ495M9 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
USH1GQ495M9 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.77■□□□□ 0.6
USH1GQ495M9 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC18.77■□□□□ 0.6
USH1GQ495M9 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
USH1GQ495M9 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
USH1GQ495M9 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
USH1GQ495M9 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
USH1GQ495M9 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
USH1GQ495M9 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
USH1GQ495M9 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC18.77■□□□□ 0.6
USH1GQ495M9 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
USH1GQ495M9 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC18.77■□□□□ 0.6
USH1GQ495M9 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
USH1GQ495M9 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
USH1GQ495M9 GREM1-201ENST00000560677 623 ntTSL 4 BASIC18.77■□□□□ 0.6
USH1GQ495M9 AC061975.2-201ENST00000581722 295 ntBASIC18.77■□□□□ 0.6
USH1GQ495M9 AL589739.1-201ENST00000607720 493 ntBASIC18.77■□□□□ 0.6
USH1GQ495M9 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
USH1GQ495M9 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
USH1GQ495M9 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
USH1GQ495M9 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
USH1GQ495M9 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
USH1GQ495M9 AL035456.1-201ENST00000456064 1369 ntBASIC18.77■□□□□ 0.6
USH1GQ495M9 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC18.77■□□□□ 0.6
USH1GQ495M9 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC18.77■□□□□ 0.59
USH1GQ495M9 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC18.77■□□□□ 0.59
USH1GQ495M9 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
USH1GQ495M9 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
USH1GQ495M9 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC18.77■□□□□ 0.59
USH1GQ495M9 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
USH1GQ495M9 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC18.76■□□□□ 0.59
USH1GQ495M9 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
USH1GQ495M9 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
USH1GQ495M9 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USH1GQ495M9 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
USH1GQ495M9 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
USH1GQ495M9 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USH1GQ495M9 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
USH1GQ495M9 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms