Protein–RNA interactions for Protein: Q09470

KCNA1, Potassium voltage-gated channel subfamily A member 1, humanhuman

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA1Q09470 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
KCNA1Q09470 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
KCNA1Q09470 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC18.03■□□□□ 0.48
KCNA1Q09470 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC18.03■□□□□ 0.48
KCNA1Q09470 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
KCNA1Q09470 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC18.03■□□□□ 0.48
KCNA1Q09470 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
KCNA1Q09470 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
KCNA1Q09470 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
KCNA1Q09470 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
KCNA1Q09470 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
KCNA1Q09470 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
KCNA1Q09470 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
KCNA1Q09470 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
KCNA1Q09470 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC18.03■□□□□ 0.48
KCNA1Q09470 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
KCNA1Q09470 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
KCNA1Q09470 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
KCNA1Q09470 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC18.02■□□□□ 0.48
KCNA1Q09470 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
KCNA1Q09470 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC18.02■□□□□ 0.48
KCNA1Q09470 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
KCNA1Q09470 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
KCNA1Q09470 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
KCNA1Q09470 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
KCNA1Q09470 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC18.02■□□□□ 0.48
KCNA1Q09470 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC18.02■□□□□ 0.48
KCNA1Q09470 AC004461.1-201ENST00000412461 403 ntBASIC18.02■□□□□ 0.48
KCNA1Q09470 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC18.02■□□□□ 0.48
KCNA1Q09470 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC18.02■□□□□ 0.48
KCNA1Q09470 AC069335.1-201ENST00000489972 472 ntBASIC18.02■□□□□ 0.48
KCNA1Q09470 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
KCNA1Q09470 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
KCNA1Q09470 AC093520.2-201ENST00000561830 333 ntBASIC18.02■□□□□ 0.48
KCNA1Q09470 QPRT-203ENST00000562473 579 ntTSL 3 BASIC18.02■□□□□ 0.48
KCNA1Q09470 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC18.02■□□□□ 0.48
KCNA1Q09470 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC18.02■□□□□ 0.48
KCNA1Q09470 SSH2-211ENST00000590153 570 ntTSL 4 BASIC18.02■□□□□ 0.48
KCNA1Q09470 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
KCNA1Q09470 FHL2-212ENST00000607522 759 ntTSL 2 BASIC18.02■□□□□ 0.48
KCNA1Q09470 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC18.02■□□□□ 0.48
KCNA1Q09470 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
KCNA1Q09470 AL513210.1-201ENST00000629608 234 ntBASIC18.02■□□□□ 0.48
KCNA1Q09470 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC18.02■□□□□ 0.47
KCNA1Q09470 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
KCNA1Q09470 AC008741.2-201ENST00000612792 3115 ntBASIC18.02■□□□□ 0.47
KCNA1Q09470 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
KCNA1Q09470 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
KCNA1Q09470 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
KCNA1Q09470 BLK-205ENST00000529894 2017 ntTSL 5 BASIC18.01■□□□□ 0.47
KCNA1Q09470 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC18.01■□□□□ 0.47
KCNA1Q09470 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
KCNA1Q09470 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.01■□□□□ 0.47
KCNA1Q09470 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
KCNA1Q09470 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
KCNA1Q09470 BANP-204ENST00000393208 2283 ntTSL 2 BASIC18.01■□□□□ 0.47
KCNA1Q09470 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC18.01■□□□□ 0.47
KCNA1Q09470 MTHFR-217ENST00000641820 1569 ntBASIC18.01■□□□□ 0.47
KCNA1Q09470 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
KCNA1Q09470 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC18.01■□□□□ 0.47
KCNA1Q09470 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
KCNA1Q09470 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
KCNA1Q09470 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
KCNA1Q09470 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
KCNA1Q09470 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
KCNA1Q09470 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC18.01■□□□□ 0.47
KCNA1Q09470 AC211486.1-202ENST00000416371 468 ntBASIC18.01■□□□□ 0.47
KCNA1Q09470 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC18.01■□□□□ 0.47
KCNA1Q09470 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC18.01■□□□□ 0.47
KCNA1Q09470 RN7SL589P-201ENST00000481268 310 ntBASIC18.01■□□□□ 0.47
KCNA1Q09470 AC211476.1-201ENST00000503899 468 ntBASIC18.01■□□□□ 0.47
KCNA1Q09470 GATB-205ENST00000508611 605 ntTSL 2 BASIC18.01■□□□□ 0.47
KCNA1Q09470 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC18.01■□□□□ 0.47
KCNA1Q09470 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC18.01■□□□□ 0.47
KCNA1Q09470 AC073389.1-201ENST00000595595 795 ntBASIC18.01■□□□□ 0.47
KCNA1Q09470 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC18.01■□□□□ 0.47
KCNA1Q09470 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC18.01■□□□□ 0.47
KCNA1Q09470 AC008267.7-201ENST00000624570 1194 ntBASIC18.01■□□□□ 0.47
KCNA1Q09470 AC134684.3-201ENST00000641758 218 ntBASIC18.01■□□□□ 0.47
KCNA1Q09470 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC18.01■□□□□ 0.47
KCNA1Q09470 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
KCNA1Q09470 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
KCNA1Q09470 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
KCNA1Q09470 AL592424.1-201ENST00000563624 1536 ntBASIC18.01■□□□□ 0.47
KCNA1Q09470 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
KCNA1Q09470 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
KCNA1Q09470 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC18.01■□□□□ 0.47
KCNA1Q09470 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC18.01■□□□□ 0.47
KCNA1Q09470 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC18.01■□□□□ 0.47
KCNA1Q09470 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
KCNA1Q09470 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
KCNA1Q09470 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
KCNA1Q09470 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
KCNA1Q09470 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
KCNA1Q09470 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
KCNA1Q09470 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
KCNA1Q09470 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
KCNA1Q09470 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC18■□□□□ 0.47
KCNA1Q09470 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC18■□□□□ 0.47
KCNA1Q09470 GOLGA2P9-201ENST00000596977 1937 ntBASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms