Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
HSPG2P98160 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
HSPG2P98160 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC9.93□□□□□ -0.82
HSPG2P98160 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
HSPG2P98160 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC9.93□□□□□ -0.82
HSPG2P98160 KRTAP19-9P-201ENST00000421795 191 ntBASIC9.93□□□□□ -0.82
HSPG2P98160 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC9.93□□□□□ -0.82
HSPG2P98160 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
HSPG2P98160 FOS-204ENST00000554617 796 ntTSL 2 BASIC9.93□□□□□ -0.82
HSPG2P98160 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC9.93□□□□□ -0.82
HSPG2P98160 AL512652.2-201ENST00000625156 1716 ntBASIC9.93□□□□□ -0.82
HSPG2P98160 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
HSPG2P98160 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC9.92□□□□□ -0.82
HSPG2P98160 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
HSPG2P98160 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
HSPG2P98160 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC9.92□□□□□ -0.82
HSPG2P98160 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
HSPG2P98160 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
HSPG2P98160 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
HSPG2P98160 TOMM22P5-201ENST00000416399 439 ntBASIC9.92□□□□□ -0.82
HSPG2P98160 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
HSPG2P98160 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC9.92□□□□□ -0.82
HSPG2P98160 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC9.92□□□□□ -0.82
HSPG2P98160 NKG7-204ENST00000595217 816 ntTSL 2 BASIC9.92□□□□□ -0.82
HSPG2P98160 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC9.92□□□□□ -0.82
HSPG2P98160 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
HSPG2P98160 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC9.92□□□□□ -0.82
HSPG2P98160 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
HSPG2P98160 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
HSPG2P98160 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
HSPG2P98160 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC9.92□□□□□ -0.82
HSPG2P98160 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
HSPG2P98160 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
HSPG2P98160 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
HSPG2P98160 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
HSPG2P98160 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC9.92□□□□□ -0.82
HSPG2P98160 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC9.92□□□□□ -0.82
HSPG2P98160 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
HSPG2P98160 FXR1-221ENST00000491674 365 ntTSL 2 BASIC9.92□□□□□ -0.82
HSPG2P98160 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC9.92□□□□□ -0.82
HSPG2P98160 NPM1P43-201ENST00000558669 786 ntBASIC9.92□□□□□ -0.82
HSPG2P98160 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
HSPG2P98160 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC9.92□□□□□ -0.82
HSPG2P98160 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
HSPG2P98160 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
HSPG2P98160 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
HSPG2P98160 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
HSPG2P98160 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
HSPG2P98160 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC9.92□□□□□ -0.82
HSPG2P98160 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
HSPG2P98160 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC9.92□□□□□ -0.82
HSPG2P98160 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
HSPG2P98160 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
HSPG2P98160 AGER-206ENST00000375070 1463 ntTSL 5 BASIC9.92□□□□□ -0.82
HSPG2P98160 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
HSPG2P98160 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
HSPG2P98160 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
HSPG2P98160 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
HSPG2P98160 TEX30-203ENST00000376022 828 ntTSL 2 BASIC9.92□□□□□ -0.82
HSPG2P98160 AC134915.1-201ENST00000426461 574 ntBASIC9.92□□□□□ -0.82
HSPG2P98160 RPSAP36-202ENST00000494591 1261 ntBASIC9.92□□□□□ -0.82
HSPG2P98160 AC125604.1-201ENST00000496255 707 ntBASIC9.92□□□□□ -0.82
HSPG2P98160 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC9.92□□□□□ -0.82
HSPG2P98160 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC9.92□□□□□ -0.82
HSPG2P98160 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC9.92□□□□□ -0.82
HSPG2P98160 GMFG-209ENST00000600322 622 ntTSL 5 BASIC9.92□□□□□ -0.82
HSPG2P98160 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
HSPG2P98160 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
HSPG2P98160 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
HSPG2P98160 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
HSPG2P98160 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
HSPG2P98160 EEF1DP6-201ENST00000449232 372 ntBASIC9.91□□□□□ -0.82
HSPG2P98160 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
HSPG2P98160 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
HSPG2P98160 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC9.91□□□□□ -0.82
HSPG2P98160 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC9.91□□□□□ -0.82
HSPG2P98160 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC9.91□□□□□ -0.82
HSPG2P98160 YRDCP1-201ENST00000621419 643 ntBASIC9.91□□□□□ -0.82
HSPG2P98160 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
HSPG2P98160 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
HSPG2P98160 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
HSPG2P98160 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC9.91□□□□□ -0.82
HSPG2P98160 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC9.91□□□□□ -0.82
HSPG2P98160 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC9.91□□□□□ -0.82
HSPG2P98160 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC9.91□□□□□ -0.82
HSPG2P98160 FST-202ENST00000396947 2538 ntTSL 5 BASIC9.91□□□□□ -0.82
HSPG2P98160 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
HSPG2P98160 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
HSPG2P98160 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
HSPG2P98160 PKIG-203ENST00000372887 769 ntTSL 3 BASIC9.91□□□□□ -0.82
HSPG2P98160 CD8B2-202ENST00000417670 633 ntBASIC9.91□□□□□ -0.82
HSPG2P98160 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
HSPG2P98160 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC9.91□□□□□ -0.82
HSPG2P98160 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
HSPG2P98160 EIF5AP2-201ENST00000585668 1047 ntBASIC9.91□□□□□ -0.82
HSPG2P98160 AC000095.1-201ENST00000603208 874 ntBASIC9.91□□□□□ -0.82
HSPG2P98160 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
HSPG2P98160 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
HSPG2P98160 DRD5P1-201ENST00000456605 1438 ntBASIC9.91□□□□□ -0.82
HSPG2P98160 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms