Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.49■□□□□ 0.23
AP1S1P61966 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
AP1S1P61966 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.49■□□□□ 0.23
AP1S1P61966 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.49■□□□□ 0.23
AP1S1P61966 AC025678.2-201ENST00000562061 970 ntBASIC16.49■□□□□ 0.23
AP1S1P61966 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.49■□□□□ 0.23
AP1S1P61966 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.49■□□□□ 0.23
AP1S1P61966 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.49■□□□□ 0.23
AP1S1P61966 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP1S1P61966 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP1S1P61966 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP1S1P61966 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP1S1P61966 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP1S1P61966 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
AP1S1P61966 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP1S1P61966 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP1S1P61966 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
AP1S1P61966 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP1S1P61966 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.49■□□□□ 0.23
AP1S1P61966 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
AP1S1P61966 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.48■□□□□ 0.23
AP1S1P61966 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
AP1S1P61966 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
AP1S1P61966 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
AP1S1P61966 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
AP1S1P61966 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
AP1S1P61966 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
AP1S1P61966 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
AP1S1P61966 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
AP1S1P61966 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
AP1S1P61966 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
AP1S1P61966 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
AP1S1P61966 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.48■□□□□ 0.23
AP1S1P61966 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
AP1S1P61966 SPDYE7P-202ENST00000420373 878 ntBASIC16.48■□□□□ 0.23
AP1S1P61966 METTL21AP1-201ENST00000438852 635 ntBASIC16.48■□□□□ 0.23
AP1S1P61966 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.48■□□□□ 0.23
AP1S1P61966 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.48■□□□□ 0.23
AP1S1P61966 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.48■□□□□ 0.23
AP1S1P61966 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.48■□□□□ 0.23
AP1S1P61966 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.48■□□□□ 0.23
AP1S1P61966 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
AP1S1P61966 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
AP1S1P61966 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
AP1S1P61966 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.48■□□□□ 0.23
AP1S1P61966 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
AP1S1P61966 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.48■□□□□ 0.23
AP1S1P61966 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.48■□□□□ 0.23
AP1S1P61966 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
AP1S1P61966 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
AP1S1P61966 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
AP1S1P61966 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.48■□□□□ 0.23
AP1S1P61966 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
AP1S1P61966 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
AP1S1P61966 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
AP1S1P61966 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
AP1S1P61966 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.48■□□□□ 0.23
AP1S1P61966 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
AP1S1P61966 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.47■□□□□ 0.23
AP1S1P61966 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
AP1S1P61966 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.47■□□□□ 0.23
AP1S1P61966 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.47■□□□□ 0.23
AP1S1P61966 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
AP1S1P61966 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
AP1S1P61966 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.47■□□□□ 0.23
AP1S1P61966 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
AP1S1P61966 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.47■□□□□ 0.23
AP1S1P61966 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.47■□□□□ 0.23
AP1S1P61966 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
AP1S1P61966 AC109322.1-201ENST00000524499 1264 ntBASIC16.47■□□□□ 0.23
AP1S1P61966 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.47■□□□□ 0.23
AP1S1P61966 AC004449.1-201ENST00000564240 433 ntBASIC16.47■□□□□ 0.23
AP1S1P61966 AC061975.2-201ENST00000581722 295 ntBASIC16.47■□□□□ 0.23
AP1S1P61966 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.47■□□□□ 0.23
AP1S1P61966 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.47■□□□□ 0.23
AP1S1P61966 MIR4321-201ENST00000592276 80 ntBASIC16.47■□□□□ 0.23
AP1S1P61966 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.47■□□□□ 0.23
AP1S1P61966 AC018529.1-201ENST00000613063 361 ntBASIC16.47■□□□□ 0.23
AP1S1P61966 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.47■□□□□ 0.23
AP1S1P61966 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
AP1S1P61966 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
AP1S1P61966 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
AP1S1P61966 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
AP1S1P61966 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
AP1S1P61966 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
AP1S1P61966 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.47■□□□□ 0.23
AP1S1P61966 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.47■□□□□ 0.23
AP1S1P61966 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.47■□□□□ 0.23
AP1S1P61966 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
AP1S1P61966 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
AP1S1P61966 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
AP1S1P61966 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
AP1S1P61966 AC084018.2-201ENST00000613093 2607 ntBASIC16.47■□□□□ 0.23
AP1S1P61966 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.46■□□□□ 0.23
AP1S1P61966 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
AP1S1P61966 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
AP1S1P61966 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.46■□□□□ 0.23
AP1S1P61966 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
AP1S1P61966 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
AP1S1P61966 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms