Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CXCR4P61073 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CXCR4P61073 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
CXCR4P61073 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CXCR4P61073 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CXCR4P61073 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.01□□□□□ -0.01
CXCR4P61073 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.01□□□□□ -0.01
CXCR4P61073 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CXCR4P61073 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CXCR4P61073 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CXCR4P61073 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.01□□□□□ -0.01
CXCR4P61073 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CXCR4P61073 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15□□□□□ -0.01
CXCR4P61073 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CXCR4P61073 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CXCR4P61073 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15□□□□□ -0.01
CXCR4P61073 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15□□□□□ -0.01
CXCR4P61073 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CXCR4P61073 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15□□□□□ -0.01
CXCR4P61073 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CXCR4P61073 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CXCR4P61073 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15□□□□□ -0.01
CXCR4P61073 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15□□□□□ -0.01
CXCR4P61073 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15□□□□□ -0.01
CXCR4P61073 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15□□□□□ -0.01
CXCR4P61073 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
CXCR4P61073 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
CXCR4P61073 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15□□□□□ -0.01
CXCR4P61073 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC15□□□□□ -0.01
CXCR4P61073 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
CXCR4P61073 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CXCR4P61073 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15□□□□□ -0.01
CXCR4P61073 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC15□□□□□ -0.01
CXCR4P61073 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC15□□□□□ -0.01
CXCR4P61073 CIB2-208ENST00000560618 804 ntTSL 2 BASIC15□□□□□ -0.01
CXCR4P61073 COX5A-202ENST00000562233 441 ntTSL 3 BASIC15□□□□□ -0.01
CXCR4P61073 COX5A-204ENST00000567270 579 ntTSL 3 BASIC15□□□□□ -0.01
CXCR4P61073 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC15□□□□□ -0.01
CXCR4P61073 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CXCR4P61073 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC15□□□□□ -0.01
CXCR4P61073 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CXCR4P61073 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15□□□□□ -0.01
CXCR4P61073 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CXCR4P61073 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15□□□□□ -0.01
CXCR4P61073 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CXCR4P61073 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15□□□□□ -0.01
CXCR4P61073 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
CXCR4P61073 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15□□□□□ -0.01
CXCR4P61073 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC15□□□□□ -0.01
CXCR4P61073 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CXCR4P61073 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
CXCR4P61073 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CXCR4P61073 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CXCR4P61073 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
CXCR4P61073 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CXCR4P61073 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CXCR4P61073 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
CXCR4P61073 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CXCR4P61073 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.99□□□□□ -0.01
CXCR4P61073 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CXCR4P61073 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CXCR4P61073 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
CXCR4P61073 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CXCR4P61073 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CXCR4P61073 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC14.99□□□□□ -0.01
CXCR4P61073 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.99□□□□□ -0.01
CXCR4P61073 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CXCR4P61073 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CXCR4P61073 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CXCR4P61073 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CXCR4P61073 NABP1-203ENST00000409510 843 ntTSL 5 BASIC14.99□□□□□ -0.01
CXCR4P61073 AC026396.1-201ENST00000419388 421 ntBASIC14.99□□□□□ -0.01
CXCR4P61073 LINC00982-205ENST00000420957 435 ntBASIC14.99□□□□□ -0.01
CXCR4P61073 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC14.99□□□□□ -0.01
CXCR4P61073 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
CXCR4P61073 FAM86EP-206ENST00000510506 987 ntBASIC14.99□□□□□ -0.01
CXCR4P61073 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC14.99□□□□□ -0.01
CXCR4P61073 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC14.99□□□□□ -0.01
CXCR4P61073 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC14.99□□□□□ -0.01
CXCR4P61073 MPDU1-223ENST00000582151 728 ntBASIC14.99□□□□□ -0.01
CXCR4P61073 AP002414.4-201ENST00000589764 1148 ntBASIC14.99□□□□□ -0.01
CXCR4P61073 AC114341.1-201ENST00000618070 349 ntBASIC14.99□□□□□ -0.01
CXCR4P61073 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CXCR4P61073 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
CXCR4P61073 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CXCR4P61073 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CXCR4P61073 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CXCR4P61073 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CXCR4P61073 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CXCR4P61073 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CXCR4P61073 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
CXCR4P61073 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
CXCR4P61073 CICP24-201ENST00000605464 2705 ntBASIC14.99□□□□□ -0.01
CXCR4P61073 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
CXCR4P61073 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CXCR4P61073 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CXCR4P61073 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CXCR4P61073 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CXCR4P61073 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
CXCR4P61073 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms