Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CLDN6P56747 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC15.71■□□□□ 0.1
CLDN6P56747 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CLDN6P56747 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
CLDN6P56747 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
CLDN6P56747 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CLDN6P56747 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN6P56747 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN6P56747 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN6P56747 AC092068.3-201ENST00000587894 2016 ntBASIC15.7■□□□□ 0.1
CLDN6P56747 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN6P56747 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN6P56747 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN6P56747 AC016396.2-201ENST00000562575 1417 ntBASIC15.7■□□□□ 0.1
CLDN6P56747 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC15.7■□□□□ 0.1
CLDN6P56747 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN6P56747 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN6P56747 IMPDH1P4-201ENST00000445028 1534 ntBASIC15.7■□□□□ 0.1
CLDN6P56747 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.7■□□□□ 0.1
CLDN6P56747 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN6P56747 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN6P56747 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.7■□□□□ 0.1
CLDN6P56747 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN6P56747 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN6P56747 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN6P56747 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CLDN6P56747 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN6P56747 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CLDN6P56747 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC15.7■□□□□ 0.1
CLDN6P56747 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.7■□□□□ 0.1
CLDN6P56747 AC114501.2-201ENST00000439631 535 ntBASIC15.7■□□□□ 0.1
CLDN6P56747 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC15.7■□□□□ 0.1
CLDN6P56747 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN6P56747 USB1-203ENST00000539737 1212 ntTSL 2 BASIC15.7■□□□□ 0.1
CLDN6P56747 AC123567.1-201ENST00000548294 1261 ntBASIC15.7■□□□□ 0.1
CLDN6P56747 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC15.7■□□□□ 0.1
CLDN6P56747 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC15.7■□□□□ 0.1
CLDN6P56747 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.7■□□□□ 0.1
CLDN6P56747 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN6P56747 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC15.7■□□□□ 0.1
CLDN6P56747 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN6P56747 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN6P56747 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
CLDN6P56747 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.7■□□□□ 0.1
CLDN6P56747 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.7■□□□□ 0.1
CLDN6P56747 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN6P56747 BOC-212ENST00000485230 2173 ntTSL 2 BASIC15.7■□□□□ 0.1
CLDN6P56747 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC15.7■□□□□ 0.1
CLDN6P56747 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN6P56747 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN6P56747 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.7■□□□□ 0.1
CLDN6P56747 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN6P56747 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN6P56747 SNX33P1-201ENST00000592116 1762 ntBASIC15.7■□□□□ 0.1
CLDN6P56747 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN6P56747 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN6P56747 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CLDN6P56747 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN6P56747 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
CLDN6P56747 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN6P56747 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN6P56747 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN6P56747 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN6P56747 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.69■□□□□ 0.1
CLDN6P56747 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.69■□□□□ 0.1
CLDN6P56747 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN6P56747 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC15.69■□□□□ 0.1
CLDN6P56747 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC15.69■□□□□ 0.1
CLDN6P56747 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC15.69■□□□□ 0.1
CLDN6P56747 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC15.69■□□□□ 0.1
CLDN6P56747 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC15.69■□□□□ 0.1
CLDN6P56747 ZNF890P-202ENST00000530367 1156 ntBASIC15.69■□□□□ 0.1
CLDN6P56747 AC055876.2-201ENST00000531834 546 ntBASIC15.69■□□□□ 0.1
CLDN6P56747 NOP2-211ENST00000540228 668 ntTSL 2 BASIC15.69■□□□□ 0.1
CLDN6P56747 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC15.69■□□□□ 0.1
CLDN6P56747 NAA38-207ENST00000576861 556 ntTSL 3 BASIC15.69■□□□□ 0.1
CLDN6P56747 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC15.69■□□□□ 0.1
CLDN6P56747 MIR6775-201ENST00000617557 69 ntBASIC15.69■□□□□ 0.1
CLDN6P56747 SNX12-206ENST00000622259 661 ntTSL 5 BASIC15.69■□□□□ 0.1
CLDN6P56747 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC15.69■□□□□ 0.1
CLDN6P56747 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN6P56747 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN6P56747 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN6P56747 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CLDN6P56747 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.69■□□□□ 0.1
CLDN6P56747 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN6P56747 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC15.69■□□□□ 0.1
CLDN6P56747 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN6P56747 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
CLDN6P56747 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN6P56747 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN6P56747 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN6P56747 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC15.68■□□□□ 0.1
CLDN6P56747 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.68■□□□□ 0.1
CLDN6P56747 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN6P56747 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN6P56747 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.68■□□□□ 0.1
CLDN6P56747 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN6P56747 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.68■□□□□ 0.1
CLDN6P56747 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms