Protein–RNA interactions for Protein: P53677

AP3M2, AP-3 complex subunit mu-2, humanhuman

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3M2P53677 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
AP3M2P53677 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
AP3M2P53677 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
AP3M2P53677 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
AP3M2P53677 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
AP3M2P53677 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
AP3M2P53677 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
AP3M2P53677 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
AP3M2P53677 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
AP3M2P53677 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.62■□□□□ 0.41
AP3M2P53677 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
AP3M2P53677 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
AP3M2P53677 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.62■□□□□ 0.41
AP3M2P53677 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
AP3M2P53677 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.62■□□□□ 0.41
AP3M2P53677 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP3M2P53677 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.61■□□□□ 0.41
AP3M2P53677 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
AP3M2P53677 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
AP3M2P53677 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.61■□□□□ 0.41
AP3M2P53677 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
AP3M2P53677 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
AP3M2P53677 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.61■□□□□ 0.41
AP3M2P53677 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP3M2P53677 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
AP3M2P53677 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
AP3M2P53677 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP3M2P53677 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP3M2P53677 MIR648-201ENST00000385046 94 ntBASIC17.61■□□□□ 0.41
AP3M2P53677 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.61■□□□□ 0.41
AP3M2P53677 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.61■□□□□ 0.41
AP3M2P53677 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.61■□□□□ 0.41
AP3M2P53677 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.61■□□□□ 0.41
AP3M2P53677 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.61■□□□□ 0.41
AP3M2P53677 AC139530.3-201ENST00000620344 690 ntBASIC17.61■□□□□ 0.41
AP3M2P53677 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP3M2P53677 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP3M2P53677 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.61■□□□□ 0.41
AP3M2P53677 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
AP3M2P53677 PCDHB19P-201ENST00000570871 2371 ntBASIC17.61■□□□□ 0.41
AP3M2P53677 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP3M2P53677 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP3M2P53677 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
AP3M2P53677 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
AP3M2P53677 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.61■□□□□ 0.41
AP3M2P53677 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
AP3M2P53677 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
AP3M2P53677 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.61■□□□□ 0.41
AP3M2P53677 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP3M2P53677 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP3M2P53677 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.6■□□□□ 0.41
AP3M2P53677 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
AP3M2P53677 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
AP3M2P53677 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
AP3M2P53677 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP3M2P53677 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
AP3M2P53677 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP3M2P53677 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
AP3M2P53677 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
AP3M2P53677 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.6■□□□□ 0.41
AP3M2P53677 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.6■□□□□ 0.41
AP3M2P53677 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
AP3M2P53677 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC17.6■□□□□ 0.41
AP3M2P53677 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC17.6■□□□□ 0.41
AP3M2P53677 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.6■□□□□ 0.41
AP3M2P53677 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP3M2P53677 AC061975.2-201ENST00000581722 295 ntBASIC17.6■□□□□ 0.41
AP3M2P53677 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC17.6■□□□□ 0.41
AP3M2P53677 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP3M2P53677 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP3M2P53677 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
AP3M2P53677 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
AP3M2P53677 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.6■□□□□ 0.41
AP3M2P53677 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP3M2P53677 AC124067.4-201ENST00000519691 2379 ntBASIC17.6■□□□□ 0.41
AP3M2P53677 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP3M2P53677 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
AP3M2P53677 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP3M2P53677 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP3M2P53677 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
AP3M2P53677 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
AP3M2P53677 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
AP3M2P53677 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP3M2P53677 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
AP3M2P53677 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
AP3M2P53677 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
AP3M2P53677 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
AP3M2P53677 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.59■□□□□ 0.41
AP3M2P53677 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
AP3M2P53677 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
AP3M2P53677 AL596087.1-201ENST00000400979 1969 ntBASIC17.59■□□□□ 0.41
AP3M2P53677 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
AP3M2P53677 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.59■□□□□ 0.41
AP3M2P53677 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.59■□□□□ 0.41
AP3M2P53677 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
AP3M2P53677 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
AP3M2P53677 AP3S2-216ENST00000617003 1561 ntBASIC17.59■□□□□ 0.41
AP3M2P53677 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
AP3M2P53677 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
AP3M2P53677 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms