Protein–RNA interactions for Protein: P42695

NCAPD3, Condensin-2 complex subunit D3, humanhuman

Predictions only

Length 1,498 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3P42695 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC28.33■■■□□ 2.13
NCAPD3P42695 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC28.33■■■□□ 2.13
NCAPD3P42695 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC28.33■■■□□ 2.13
NCAPD3P42695 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
NCAPD3P42695 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
NCAPD3P42695 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC28.33■■■□□ 2.13
NCAPD3P42695 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC28.33■■■□□ 2.13
NCAPD3P42695 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
NCAPD3P42695 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
NCAPD3P42695 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC28.33■■■□□ 2.13
NCAPD3P42695 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC28.33■■■□□ 2.13
NCAPD3P42695 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC28.33■■■□□ 2.13
NCAPD3P42695 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC28.33■■■□□ 2.13
NCAPD3P42695 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC28.33■■■□□ 2.13
NCAPD3P42695 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC28.33■■■□□ 2.13
NCAPD3P42695 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC28.33■■■□□ 2.13
NCAPD3P42695 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC28.33■■■□□ 2.13
NCAPD3P42695 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
NCAPD3P42695 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
NCAPD3P42695 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
NCAPD3P42695 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
NCAPD3P42695 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
NCAPD3P42695 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
NCAPD3P42695 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC28.32■■■□□ 2.12
NCAPD3P42695 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
NCAPD3P42695 DEF8-202ENST00000418391 852 ntTSL 2 BASIC28.32■■■□□ 2.12
NCAPD3P42695 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC28.32■■■□□ 2.12
NCAPD3P42695 AC016700.1-201ENST00000429424 312 ntBASIC28.32■■■□□ 2.12
NCAPD3P42695 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC28.32■■■□□ 2.12
NCAPD3P42695 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC28.32■■■□□ 2.12
NCAPD3P42695 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC28.32■■■□□ 2.12
NCAPD3P42695 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC28.32■■■□□ 2.12
NCAPD3P42695 AC093813.1-201ENST00000605066 256 ntBASIC28.32■■■□□ 2.12
NCAPD3P42695 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC28.32■■■□□ 2.12
NCAPD3P42695 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC28.32■■■□□ 2.12
NCAPD3P42695 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
NCAPD3P42695 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC28.32■■■□□ 2.12
NCAPD3P42695 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC28.32■■■□□ 2.12
NCAPD3P42695 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC28.32■■■□□ 2.12
NCAPD3P42695 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC28.31■■■□□ 2.12
NCAPD3P42695 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC28.31■■■□□ 2.12
NCAPD3P42695 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC28.31■■■□□ 2.12
NCAPD3P42695 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
NCAPD3P42695 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
NCAPD3P42695 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC28.31■■■□□ 2.12
NCAPD3P42695 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
NCAPD3P42695 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
NCAPD3P42695 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC28.31■■■□□ 2.12
NCAPD3P42695 POM121L10P-201ENST00000436994 1285 ntBASIC28.31■■■□□ 2.12
NCAPD3P42695 HNRNPUP1-201ENST00000554987 333 ntBASIC28.31■■■□□ 2.12
NCAPD3P42695 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
NCAPD3P42695 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC28.31■■■□□ 2.12
NCAPD3P42695 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
NCAPD3P42695 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC28.31■■■□□ 2.12
NCAPD3P42695 AL451050.2-201ENST00000606967 682 ntBASIC28.31■■■□□ 2.12
NCAPD3P42695 AC006453.4-201ENST00000636949 1252 ntBASIC28.31■■■□□ 2.12
NCAPD3P42695 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC28.31■■■□□ 2.12
NCAPD3P42695 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC28.31■■■□□ 2.12
NCAPD3P42695 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC28.31■■■□□ 2.12
NCAPD3P42695 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
NCAPD3P42695 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC28.31■■■□□ 2.12
NCAPD3P42695 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC28.3■■■□□ 2.12
NCAPD3P42695 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
NCAPD3P42695 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC28.3■■■□□ 2.12
NCAPD3P42695 RPL17P11-201ENST00000417593 544 ntBASIC28.3■■■□□ 2.12
NCAPD3P42695 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
NCAPD3P42695 AL590640.2-201ENST00000457038 527 ntBASIC28.3■■■□□ 2.12
NCAPD3P42695 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC28.3■■■□□ 2.12
NCAPD3P42695 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC28.3■■■□□ 2.12
NCAPD3P42695 GPX4-206ENST00000588919 803 ntTSL 2 BASIC28.3■■■□□ 2.12
NCAPD3P42695 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC28.3■■■□□ 2.12
NCAPD3P42695 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC28.3■■■□□ 2.12
NCAPD3P42695 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC28.3■■■□□ 2.12
NCAPD3P42695 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
NCAPD3P42695 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
NCAPD3P42695 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC28.3■■■□□ 2.12
NCAPD3P42695 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
NCAPD3P42695 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
NCAPD3P42695 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
NCAPD3P42695 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
NCAPD3P42695 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC28.29■■■□□ 2.12
NCAPD3P42695 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC28.29■■■□□ 2.12
NCAPD3P42695 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
NCAPD3P42695 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC28.29■■■□□ 2.12
NCAPD3P42695 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC28.29■■■□□ 2.12
NCAPD3P42695 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC28.29■■■□□ 2.12
NCAPD3P42695 CD8B2-202ENST00000417670 633 ntBASIC28.29■■■□□ 2.12
NCAPD3P42695 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC28.29■■■□□ 2.12
NCAPD3P42695 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC28.29■■■□□ 2.12
NCAPD3P42695 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC28.29■■■□□ 2.12
NCAPD3P42695 KRT18P43-201ENST00000469825 1281 ntBASIC28.29■■■□□ 2.12
NCAPD3P42695 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
NCAPD3P42695 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC28.29■■■□□ 2.12
NCAPD3P42695 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC28.29■■■□□ 2.12
NCAPD3P42695 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC28.29■■■□□ 2.12
NCAPD3P42695 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
NCAPD3P42695 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC28.29■■■□□ 2.12
NCAPD3P42695 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
NCAPD3P42695 CROCCP2-202ENST00000412962 2773 ntBASIC28.29■■■□□ 2.12
NCAPD3P42695 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC28.29■■■□□ 2.12
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms