Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTNNA1P35221 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTNNA1P35221 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTNNA1P35221 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CTNNA1P35221 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC17.4■□□□□ 0.38
CTNNA1P35221 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC17.4■□□□□ 0.38
CTNNA1P35221 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CTNNA1P35221 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.4■□□□□ 0.38
CTNNA1P35221 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.4■□□□□ 0.38
CTNNA1P35221 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTNNA1P35221 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CTNNA1P35221 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CTNNA1P35221 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.4■□□□□ 0.38
CTNNA1P35221 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CTNNA1P35221 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTNNA1P35221 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CTNNA1P35221 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTNNA1P35221 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.4■□□□□ 0.38
CTNNA1P35221 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTNNA1P35221 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTNNA1P35221 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.4■□□□□ 0.38
CTNNA1P35221 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTNNA1P35221 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CTNNA1P35221 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTNNA1P35221 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTNNA1P35221 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
CTNNA1P35221 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CTNNA1P35221 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.39■□□□□ 0.37
CTNNA1P35221 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.39■□□□□ 0.37
CTNNA1P35221 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTNNA1P35221 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CTNNA1P35221 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC17.39■□□□□ 0.37
CTNNA1P35221 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTNNA1P35221 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CTNNA1P35221 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTNNA1P35221 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTNNA1P35221 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTNNA1P35221 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTNNA1P35221 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC17.39■□□□□ 0.37
CTNNA1P35221 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTNNA1P35221 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CTNNA1P35221 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CTNNA1P35221 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CTNNA1P35221 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.39■□□□□ 0.37
CTNNA1P35221 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTNNA1P35221 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.39■□□□□ 0.37
CTNNA1P35221 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.39■□□□□ 0.37
CTNNA1P35221 AC136632.2-201ENST00000512891 861 ntBASIC17.39■□□□□ 0.37
CTNNA1P35221 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.39■□□□□ 0.37
CTNNA1P35221 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.39■□□□□ 0.37
CTNNA1P35221 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.39■□□□□ 0.37
CTNNA1P35221 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.39■□□□□ 0.37
CTNNA1P35221 AC008667.4-201ENST00000607370 168 ntBASIC17.39■□□□□ 0.37
CTNNA1P35221 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CTNNA1P35221 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.37
CTNNA1P35221 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.39■□□□□ 0.37
CTNNA1P35221 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CTNNA1P35221 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTNNA1P35221 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTNNA1P35221 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CTNNA1P35221 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CTNNA1P35221 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTNNA1P35221 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CTNNA1P35221 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.38■□□□□ 0.37
CTNNA1P35221 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.38■□□□□ 0.37
CTNNA1P35221 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.38■□□□□ 0.37
CTNNA1P35221 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTNNA1P35221 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTNNA1P35221 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CTNNA1P35221 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.38■□□□□ 0.37
CTNNA1P35221 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.38■□□□□ 0.37
CTNNA1P35221 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTNNA1P35221 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTNNA1P35221 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTNNA1P35221 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTNNA1P35221 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.38■□□□□ 0.37
CTNNA1P35221 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CTNNA1P35221 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.38■□□□□ 0.37
CTNNA1P35221 DUSP5P1-201ENST00000441325 1139 ntBASIC17.38■□□□□ 0.37
CTNNA1P35221 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.38■□□□□ 0.37
CTNNA1P35221 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.38■□□□□ 0.37
CTNNA1P35221 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.38■□□□□ 0.37
CTNNA1P35221 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.38■□□□□ 0.37
CTNNA1P35221 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CTNNA1P35221 LINC01711-201ENST00000598340 967 ntBASIC17.38■□□□□ 0.37
CTNNA1P35221 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CTNNA1P35221 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTNNA1P35221 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC17.38■□□□□ 0.37
CTNNA1P35221 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CTNNA1P35221 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CTNNA1P35221 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.38■□□□□ 0.37
CTNNA1P35221 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
CTNNA1P35221 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTNNA1P35221 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CTNNA1P35221 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTNNA1P35221 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTNNA1P35221 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CTNNA1P35221 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
CTNNA1P35221 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CTNNA1P35221 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms