Protein–RNA interactions for Protein: P28472

GABRB3, Gamma-aminobutyric acid receptor subunit beta-3, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3P28472 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
GABRB3P28472 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.31■□□□□ 0.2
GABRB3P28472 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.3■□□□□ 0.2
GABRB3P28472 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
GABRB3P28472 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
GABRB3P28472 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GABRB3P28472 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GABRB3P28472 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
GABRB3P28472 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GABRB3P28472 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.3■□□□□ 0.2
GABRB3P28472 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
GABRB3P28472 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GABRB3P28472 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.3■□□□□ 0.2
GABRB3P28472 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
GABRB3P28472 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
GABRB3P28472 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GABRB3P28472 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.3■□□□□ 0.2
GABRB3P28472 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
GABRB3P28472 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.3■□□□□ 0.2
GABRB3P28472 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
GABRB3P28472 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
GABRB3P28472 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
GABRB3P28472 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
GABRB3P28472 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
GABRB3P28472 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.3■□□□□ 0.2
GABRB3P28472 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.3■□□□□ 0.2
GABRB3P28472 AC140658.5-201ENST00000438532 169 ntBASIC16.3■□□□□ 0.2
GABRB3P28472 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
GABRB3P28472 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.3■□□□□ 0.2
GABRB3P28472 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.3■□□□□ 0.2
GABRB3P28472 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GABRB3P28472 KRT19P2-202ENST00000557173 1012 ntBASIC16.3■□□□□ 0.2
GABRB3P28472 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.3■□□□□ 0.2
GABRB3P28472 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.3■□□□□ 0.2
GABRB3P28472 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
GABRB3P28472 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.3■□□□□ 0.2
GABRB3P28472 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
GABRB3P28472 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.3■□□□□ 0.2
GABRB3P28472 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.3■□□□□ 0.2
GABRB3P28472 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
GABRB3P28472 AC007064.4-201ENST00000637740 555 ntBASIC16.3■□□□□ 0.2
GABRB3P28472 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.3■□□□□ 0.2
GABRB3P28472 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GABRB3P28472 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.3■□□□□ 0.2
GABRB3P28472 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
GABRB3P28472 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.3■□□□□ 0.2
GABRB3P28472 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GABRB3P28472 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
GABRB3P28472 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.3■□□□□ 0.2
GABRB3P28472 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
GABRB3P28472 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
GABRB3P28472 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
GABRB3P28472 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
GABRB3P28472 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GABRB3P28472 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
GABRB3P28472 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
GABRB3P28472 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GABRB3P28472 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
GABRB3P28472 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GABRB3P28472 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GABRB3P28472 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GABRB3P28472 OR6D1P-203ENST00000641209 4860 ntBASIC16.29■□□□□ 0.2
GABRB3P28472 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GABRB3P28472 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.29■□□□□ 0.2
GABRB3P28472 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
GABRB3P28472 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GABRB3P28472 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
GABRB3P28472 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
GABRB3P28472 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GABRB3P28472 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.29■□□□□ 0.2
GABRB3P28472 BCAR1-209ENST00000546196 1340 ntBASIC16.29■□□□□ 0.2
GABRB3P28472 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
GABRB3P28472 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GABRB3P28472 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
GABRB3P28472 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
GABRB3P28472 MIR648-201ENST00000385046 94 ntBASIC16.29■□□□□ 0.2
GABRB3P28472 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.29■□□□□ 0.2
GABRB3P28472 FDX1P1-201ENST00000449115 551 ntBASIC16.29■□□□□ 0.2
GABRB3P28472 RPL13AP23-201ENST00000480739 586 ntBASIC16.29■□□□□ 0.2
GABRB3P28472 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.29■□□□□ 0.2
GABRB3P28472 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.29■□□□□ 0.2
GABRB3P28472 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.29■□□□□ 0.2
GABRB3P28472 AL078644.1-201ENST00000609881 752 ntBASIC16.29■□□□□ 0.2
GABRB3P28472 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.29■□□□□ 0.2
GABRB3P28472 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.29■□□□□ 0.2
GABRB3P28472 AC016027.1-202ENST00000607927 1699 ntBASIC16.29■□□□□ 0.2
GABRB3P28472 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
GABRB3P28472 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
GABRB3P28472 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.29■□□□□ 0.2
GABRB3P28472 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
GABRB3P28472 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GABRB3P28472 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.29■□□□□ 0.2
GABRB3P28472 AC008677.1-201ENST00000519230 1561 ntBASIC16.29■□□□□ 0.2
GABRB3P28472 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.29■□□□□ 0.2
GABRB3P28472 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
GABRB3P28472 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GABRB3P28472 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GABRB3P28472 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.29■□□□□ 0.2
GABRB3P28472 AC068418.2-201ENST00000577309 3703 ntBASIC16.29■□□□□ 0.2
GABRB3P28472 AC023824.1-201ENST00000562945 2975 ntBASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms