Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN3P26045 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.74■□□□□ 0.27
PTPN3P26045 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.74■□□□□ 0.27
PTPN3P26045 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN3P26045 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN3P26045 AL603832.2-201ENST00000566195 2125 ntBASIC16.73■□□□□ 0.27
PTPN3P26045 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN3P26045 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN3P26045 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.73■□□□□ 0.27
PTPN3P26045 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN3P26045 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN3P26045 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN3P26045 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN3P26045 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN3P26045 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
PTPN3P26045 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN3P26045 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN3P26045 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.73■□□□□ 0.27
PTPN3P26045 POLD2P1-201ENST00000511220 997 ntBASIC16.73■□□□□ 0.27
PTPN3P26045 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.73■□□□□ 0.27
PTPN3P26045 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.73■□□□□ 0.27
PTPN3P26045 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.73■□□□□ 0.27
PTPN3P26045 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN3P26045 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.73■□□□□ 0.27
PTPN3P26045 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
PTPN3P26045 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.73■□□□□ 0.27
PTPN3P26045 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
PTPN3P26045 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN3P26045 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
PTPN3P26045 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN3P26045 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN3P26045 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.73■□□□□ 0.27
PTPN3P26045 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN3P26045 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN3P26045 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.73■□□□□ 0.27
PTPN3P26045 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.73■□□□□ 0.27
PTPN3P26045 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN3P26045 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
PTPN3P26045 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTPN3P26045 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTPN3P26045 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTPN3P26045 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PTPN3P26045 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTPN3P26045 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTPN3P26045 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTPN3P26045 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.72■□□□□ 0.27
PTPN3P26045 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTPN3P26045 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTPN3P26045 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTPN3P26045 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTPN3P26045 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
PTPN3P26045 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.72■□□□□ 0.27
PTPN3P26045 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
PTPN3P26045 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTPN3P26045 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.72■□□□□ 0.27
PTPN3P26045 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PTPN3P26045 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.72■□□□□ 0.27
PTPN3P26045 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.72■□□□□ 0.27
PTPN3P26045 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.72■□□□□ 0.27
PTPN3P26045 AC040169.1-201ENST00000565382 521 ntBASIC16.72■□□□□ 0.27
PTPN3P26045 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
PTPN3P26045 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTPN3P26045 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.72■□□□□ 0.27
PTPN3P26045 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.72■□□□□ 0.27
PTPN3P26045 AL671883.3-201ENST00000603274 991 ntBASIC16.72■□□□□ 0.27
PTPN3P26045 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
PTPN3P26045 AC091812.2-201ENST00000619081 385 ntBASIC16.72■□□□□ 0.27
PTPN3P26045 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
PTPN3P26045 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.72■□□□□ 0.27
PTPN3P26045 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.72■□□□□ 0.27
PTPN3P26045 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTPN3P26045 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.72■□□□□ 0.27
PTPN3P26045 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
PTPN3P26045 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.72■□□□□ 0.27
PTPN3P26045 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
PTPN3P26045 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
PTPN3P26045 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.72■□□□□ 0.27
PTPN3P26045 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.72■□□□□ 0.27
PTPN3P26045 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PTPN3P26045 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
PTPN3P26045 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTPN3P26045 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.72■□□□□ 0.27
PTPN3P26045 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTPN3P26045 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
PTPN3P26045 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.71■□□□□ 0.27
PTPN3P26045 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
PTPN3P26045 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.71■□□□□ 0.27
PTPN3P26045 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PTPN3P26045 AL365203.3-201ENST00000609742 2057 ntBASIC16.71■□□□□ 0.27
PTPN3P26045 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PTPN3P26045 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
PTPN3P26045 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
PTPN3P26045 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.71■□□□□ 0.27
PTPN3P26045 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
PTPN3P26045 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PTPN3P26045 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PTPN3P26045 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.71■□□□□ 0.27
PTPN3P26045 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.71■□□□□ 0.27
PTPN3P26045 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PTPN3P26045 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms