Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LAMA1P25391 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
LAMA1P25391 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LAMA1P25391 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LAMA1P25391 GPAA1P2-201ENST00000417923 928 ntBASIC15.8■□□□□ 0.12
LAMA1P25391 GOLGA2P4-201ENST00000441462 777 ntBASIC15.8■□□□□ 0.12
LAMA1P25391 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC15.8■□□□□ 0.12
LAMA1P25391 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC15.8■□□□□ 0.12
LAMA1P25391 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LAMA1P25391 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC15.8■□□□□ 0.12
LAMA1P25391 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LAMA1P25391 AL391256.1-201ENST00000443260 1855 ntBASIC15.8■□□□□ 0.12
LAMA1P25391 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LAMA1P25391 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.8■□□□□ 0.12
LAMA1P25391 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
LAMA1P25391 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
LAMA1P25391 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LAMA1P25391 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LAMA1P25391 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LAMA1P25391 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.8■□□□□ 0.12
LAMA1P25391 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15.8■□□□□ 0.12
LAMA1P25391 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
LAMA1P25391 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC15.8■□□□□ 0.12
LAMA1P25391 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC15.8■□□□□ 0.12
LAMA1P25391 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.8■□□□□ 0.12
LAMA1P25391 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
LAMA1P25391 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC15.8■□□□□ 0.12
LAMA1P25391 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LAMA1P25391 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
LAMA1P25391 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LAMA1P25391 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC15.79■□□□□ 0.12
LAMA1P25391 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC15.79■□□□□ 0.12
LAMA1P25391 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC15.79■□□□□ 0.12
LAMA1P25391 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
LAMA1P25391 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC15.79■□□□□ 0.12
LAMA1P25391 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
LAMA1P25391 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LAMA1P25391 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LAMA1P25391 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.79■□□□□ 0.12
LAMA1P25391 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LAMA1P25391 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LAMA1P25391 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LAMA1P25391 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
LAMA1P25391 KRT8P39-201ENST00000396270 1433 ntBASIC15.79■□□□□ 0.12
LAMA1P25391 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC15.79■□□□□ 0.12
LAMA1P25391 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.79■□□□□ 0.12
LAMA1P25391 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC15.79■□□□□ 0.12
LAMA1P25391 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC15.79■□□□□ 0.12
LAMA1P25391 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC15.79■□□□□ 0.12
LAMA1P25391 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
LAMA1P25391 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
LAMA1P25391 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.79■□□□□ 0.12
LAMA1P25391 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.79■□□□□ 0.12
LAMA1P25391 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
LAMA1P25391 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC15.79■□□□□ 0.12
LAMA1P25391 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LAMA1P25391 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
LAMA1P25391 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC15.79■□□□□ 0.12
LAMA1P25391 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LAMA1P25391 KLF2P4-201ENST00000451959 1225 ntBASIC15.79■□□□□ 0.12
LAMA1P25391 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.79■□□□□ 0.12
LAMA1P25391 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15.79■□□□□ 0.12
LAMA1P25391 AC074044.1-201ENST00000609673 707 ntBASIC15.79■□□□□ 0.12
LAMA1P25391 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LAMA1P25391 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LAMA1P25391 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
LAMA1P25391 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LAMA1P25391 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
LAMA1P25391 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LAMA1P25391 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
LAMA1P25391 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LAMA1P25391 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LAMA1P25391 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LAMA1P25391 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LAMA1P25391 KRT8P13-201ENST00000463294 1010 ntBASIC15.78■□□□□ 0.12
LAMA1P25391 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC15.78■□□□□ 0.12
LAMA1P25391 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.78■□□□□ 0.12
LAMA1P25391 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC15.78■□□□□ 0.12
LAMA1P25391 AC026979.3-201ENST00000607315 403 ntBASIC15.78■□□□□ 0.12
LAMA1P25391 MIR6069-201ENST00000620069 79 ntBASIC15.78■□□□□ 0.12
LAMA1P25391 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LAMA1P25391 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
LAMA1P25391 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC15.78■□□□□ 0.12
LAMA1P25391 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LAMA1P25391 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.78■□□□□ 0.12
LAMA1P25391 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LAMA1P25391 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LAMA1P25391 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LAMA1P25391 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
LAMA1P25391 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LAMA1P25391 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LAMA1P25391 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LAMA1P25391 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.78■□□□□ 0.12
LAMA1P25391 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LAMA1P25391 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LAMA1P25391 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC15.78■□□□□ 0.12
LAMA1P25391 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.78■□□□□ 0.12
LAMA1P25391 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.78■□□□□ 0.12
LAMA1P25391 TARDBPP1-201ENST00000442013 1203 ntBASIC15.78■□□□□ 0.12
LAMA1P25391 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms