Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
MMP8P22894 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MMP8P22894 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
MMP8P22894 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MMP8P22894 AC008741.2-201ENST00000612792 3115 ntBASIC17.23■□□□□ 0.35
MMP8P22894 AC008894.3-201ENST00000624324 3103 ntBASIC17.23■□□□□ 0.35
MMP8P22894 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MMP8P22894 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MMP8P22894 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MMP8P22894 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MMP8P22894 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MMP8P22894 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
MMP8P22894 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
MMP8P22894 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MMP8P22894 YBX2P1-201ENST00000394192 760 ntBASIC17.23■□□□□ 0.35
MMP8P22894 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.23■□□□□ 0.35
MMP8P22894 TFAMP1-201ENST00000412727 736 ntBASIC17.23■□□□□ 0.35
MMP8P22894 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.23■□□□□ 0.35
MMP8P22894 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
MMP8P22894 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.23■□□□□ 0.35
MMP8P22894 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.23■□□□□ 0.35
MMP8P22894 AL365330.1-201ENST00000607459 531 ntBASIC17.23■□□□□ 0.35
MMP8P22894 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.23■□□□□ 0.35
MMP8P22894 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MMP8P22894 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MMP8P22894 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
MMP8P22894 AC112504.1-201ENST00000623415 1841 ntBASIC17.23■□□□□ 0.35
MMP8P22894 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
MMP8P22894 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17.23■□□□□ 0.35
MMP8P22894 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MMP8P22894 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
MMP8P22894 LINC02447-202ENST00000501888 2146 ntBASIC17.23■□□□□ 0.35
MMP8P22894 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
MMP8P22894 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC17.23■□□□□ 0.35
MMP8P22894 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC17.23■□□□□ 0.35
MMP8P22894 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.23■□□□□ 0.35
MMP8P22894 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
MMP8P22894 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
MMP8P22894 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MMP8P22894 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.22■□□□□ 0.35
MMP8P22894 FOXO1B-201ENST00000504678 1527 ntBASIC17.22■□□□□ 0.35
MMP8P22894 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
MMP8P22894 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.22■□□□□ 0.35
MMP8P22894 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
MMP8P22894 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.22■□□□□ 0.35
MMP8P22894 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
MMP8P22894 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
MMP8P22894 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
MMP8P22894 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MMP8P22894 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.22■□□□□ 0.35
MMP8P22894 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.22■□□□□ 0.35
MMP8P22894 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.22■□□□□ 0.35
MMP8P22894 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
MMP8P22894 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
MMP8P22894 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.22■□□□□ 0.35
MMP8P22894 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
MMP8P22894 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
MMP8P22894 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
MMP8P22894 AC008677.1-201ENST00000519230 1561 ntBASIC17.22■□□□□ 0.35
MMP8P22894 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
MMP8P22894 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
MMP8P22894 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MMP8P22894 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MMP8P22894 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
MMP8P22894 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MMP8P22894 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.21■□□□□ 0.35
MMP8P22894 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.21■□□□□ 0.35
MMP8P22894 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.21■□□□□ 0.35
MMP8P22894 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
MMP8P22894 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
MMP8P22894 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
MMP8P22894 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
MMP8P22894 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
MMP8P22894 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
MMP8P22894 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MMP8P22894 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
MMP8P22894 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.21■□□□□ 0.35
MMP8P22894 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MMP8P22894 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MMP8P22894 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
MMP8P22894 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MMP8P22894 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
MMP8P22894 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
MMP8P22894 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
MMP8P22894 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
MMP8P22894 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
MMP8P22894 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.21■□□□□ 0.35
MMP8P22894 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
MMP8P22894 MKNK2P1-201ENST00000437526 628 ntBASIC17.21■□□□□ 0.35
MMP8P22894 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.21■□□□□ 0.35
MMP8P22894 ACTG1P14-201ENST00000446382 1122 ntBASIC17.21■□□□□ 0.35
MMP8P22894 AC105233.2-201ENST00000523697 349 ntBASIC17.21■□□□□ 0.35
MMP8P22894 AF228730.5-201ENST00000530288 346 ntBASIC17.21■□□□□ 0.35
MMP8P22894 AC243562.1-201ENST00000560672 389 ntBASIC17.21■□□□□ 0.35
MMP8P22894 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC17.21■□□□□ 0.35
MMP8P22894 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.21■□□□□ 0.35
MMP8P22894 MTDHP5-201ENST00000598980 586 ntBASIC17.21■□□□□ 0.35
MMP8P22894 AC008267.7-201ENST00000624570 1194 ntBASIC17.21■□□□□ 0.35
MMP8P22894 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.21■□□□□ 0.35
MMP8P22894 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms