Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LMNB1P20700 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC19.71■□□□□ 0.75
LMNB1P20700 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
LMNB1P20700 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LMNB1P20700 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
LMNB1P20700 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.71■□□□□ 0.75
LMNB1P20700 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LMNB1P20700 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LMNB1P20700 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LMNB1P20700 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.71■□□□□ 0.75
LMNB1P20700 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LMNB1P20700 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LMNB1P20700 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC19.71■□□□□ 0.75
LMNB1P20700 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC19.71■□□□□ 0.75
LMNB1P20700 CALR4P-201ENST00000431943 946 ntBASIC19.71■□□□□ 0.75
LMNB1P20700 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
LMNB1P20700 AL355864.2-201ENST00000447420 863 ntBASIC19.71■□□□□ 0.75
LMNB1P20700 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC19.71■□□□□ 0.75
LMNB1P20700 IGHJ2P-201ENST00000454480 60 ntBASIC19.71■□□□□ 0.75
LMNB1P20700 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC19.71■□□□□ 0.75
LMNB1P20700 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC19.71■□□□□ 0.75
LMNB1P20700 ENPP7P5-201ENST00000541031 1031 ntBASIC19.71■□□□□ 0.75
LMNB1P20700 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC19.71■□□□□ 0.75
LMNB1P20700 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC19.71■□□□□ 0.75
LMNB1P20700 AL359711.2-201ENST00000563105 872 ntBASIC19.71■□□□□ 0.75
LMNB1P20700 AL118558.3-201ENST00000607414 1079 ntBASIC19.71■□□□□ 0.75
LMNB1P20700 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
LMNB1P20700 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC19.71■□□□□ 0.75
LMNB1P20700 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LMNB1P20700 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
LMNB1P20700 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LMNB1P20700 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LMNB1P20700 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LMNB1P20700 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LMNB1P20700 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC19.71■□□□□ 0.75
LMNB1P20700 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LMNB1P20700 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LMNB1P20700 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LMNB1P20700 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LMNB1P20700 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LMNB1P20700 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LMNB1P20700 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.71■□□□□ 0.74
LMNB1P20700 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LMNB1P20700 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC19.7■□□□□ 0.74
LMNB1P20700 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
LMNB1P20700 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LMNB1P20700 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LMNB1P20700 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LMNB1P20700 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LMNB1P20700 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LMNB1P20700 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC19.7■□□□□ 0.74
LMNB1P20700 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
LMNB1P20700 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
LMNB1P20700 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC19.7■□□□□ 0.74
LMNB1P20700 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
LMNB1P20700 AL365330.1-201ENST00000607459 531 ntBASIC19.7■□□□□ 0.74
LMNB1P20700 AL021578.1-201ENST00000613646 709 ntBASIC19.7■□□□□ 0.74
LMNB1P20700 MIR6727-201ENST00000620702 65 ntBASIC19.7■□□□□ 0.74
LMNB1P20700 AL158212.4-201ENST00000624062 1286 ntBASIC19.7■□□□□ 0.74
LMNB1P20700 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
LMNB1P20700 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LMNB1P20700 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
LMNB1P20700 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
LMNB1P20700 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.7■□□□□ 0.74
LMNB1P20700 PCDHB18P-201ENST00000524813 2368 ntBASIC19.7■□□□□ 0.74
LMNB1P20700 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
LMNB1P20700 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.7■□□□□ 0.74
LMNB1P20700 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LMNB1P20700 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LMNB1P20700 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LMNB1P20700 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
LMNB1P20700 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC19.69■□□□□ 0.74
LMNB1P20700 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
LMNB1P20700 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LMNB1P20700 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LMNB1P20700 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
LMNB1P20700 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
LMNB1P20700 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LMNB1P20700 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC19.69■□□□□ 0.74
LMNB1P20700 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC19.69■□□□□ 0.74
LMNB1P20700 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC19.69■□□□□ 0.74
LMNB1P20700 AP001258.2-201ENST00000529891 490 ntBASIC19.69■□□□□ 0.74
LMNB1P20700 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC19.69■□□□□ 0.74
LMNB1P20700 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC19.69■□□□□ 0.74
LMNB1P20700 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC19.69■□□□□ 0.74
LMNB1P20700 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC19.69■□□□□ 0.74
LMNB1P20700 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC19.69■□□□□ 0.74
LMNB1P20700 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LMNB1P20700 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
LMNB1P20700 AMT-232ENST00000636199 1546 ntTSL 5 BASIC19.69■□□□□ 0.74
LMNB1P20700 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
LMNB1P20700 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LMNB1P20700 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC19.69■□□□□ 0.74
LMNB1P20700 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LMNB1P20700 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LMNB1P20700 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
LMNB1P20700 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LMNB1P20700 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LMNB1P20700 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LMNB1P20700 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms