Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ERCC3P19447 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ERCC3P19447 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC18.98■□□□□ 0.63
ERCC3P19447 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ERCC3P19447 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ERCC3P19447 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ERCC3P19447 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ERCC3P19447 AL513477.1-201ENST00000602865 2407 ntBASIC18.98■□□□□ 0.63
ERCC3P19447 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
ERCC3P19447 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ERCC3P19447 GK-202ENST00000378941 458 ntTSL 3 BASIC18.98■□□□□ 0.63
ERCC3P19447 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ERCC3P19447 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC18.98■□□□□ 0.63
ERCC3P19447 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ERCC3P19447 COQ6-210ENST00000554920 649 ntTSL 3 BASIC18.98■□□□□ 0.63
ERCC3P19447 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
ERCC3P19447 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ERCC3P19447 AC027307.3-201ENST00000594262 1100 ntBASIC18.98■□□□□ 0.63
ERCC3P19447 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
ERCC3P19447 SPTSSB-204ENST00000617024 1292 ntBASIC18.98■□□□□ 0.63
ERCC3P19447 AC025048.6-201ENST00000634326 1161 ntBASIC18.98■□□□□ 0.63
ERCC3P19447 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC18.98■□□□□ 0.63
ERCC3P19447 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ERCC3P19447 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
ERCC3P19447 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
ERCC3P19447 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ERCC3P19447 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ERCC3P19447 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
ERCC3P19447 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ERCC3P19447 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ERCC3P19447 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC18.98■□□□□ 0.63
ERCC3P19447 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
ERCC3P19447 TUBB8P12-201ENST00000308911 1335 ntBASIC18.98■□□□□ 0.63
ERCC3P19447 TUBB7P-202ENST00000428444 1305 ntBASIC18.98■□□□□ 0.63
ERCC3P19447 TUBB8P7-204ENST00000567960 1332 ntBASIC18.98■□□□□ 0.63
ERCC3P19447 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ERCC3P19447 AC046158.3-201ENST00000624947 2558 ntBASIC18.97■□□□□ 0.63
ERCC3P19447 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC18.97■□□□□ 0.63
ERCC3P19447 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ERCC3P19447 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ERCC3P19447 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ERCC3P19447 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ERCC3P19447 AC006277.1-201ENST00000624348 1610 ntBASIC18.97■□□□□ 0.63
ERCC3P19447 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
ERCC3P19447 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
ERCC3P19447 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
ERCC3P19447 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ERCC3P19447 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
ERCC3P19447 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ERCC3P19447 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC18.97■□□□□ 0.63
ERCC3P19447 AL353705.2-201ENST00000428243 662 ntBASIC18.97■□□□□ 0.63
ERCC3P19447 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC18.97■□□□□ 0.63
ERCC3P19447 SPTLC1P1-201ENST00000447199 261 ntBASIC18.97■□□□□ 0.63
ERCC3P19447 TMPRSS11CP-201ENST00000453277 683 ntBASIC18.97■□□□□ 0.63
ERCC3P19447 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ERCC3P19447 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC18.97■□□□□ 0.63
ERCC3P19447 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
ERCC3P19447 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC18.97■□□□□ 0.63
ERCC3P19447 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC18.97■□□□□ 0.63
ERCC3P19447 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC18.97■□□□□ 0.63
ERCC3P19447 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.97■□□□□ 0.63
ERCC3P19447 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC18.97■□□□□ 0.63
ERCC3P19447 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC18.97■□□□□ 0.63
ERCC3P19447 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC18.97■□□□□ 0.63
ERCC3P19447 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.97■□□□□ 0.63
ERCC3P19447 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ERCC3P19447 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ERCC3P19447 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
ERCC3P19447 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ERCC3P19447 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ERCC3P19447 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ERCC3P19447 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
ERCC3P19447 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
ERCC3P19447 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
ERCC3P19447 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ERCC3P19447 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
ERCC3P19447 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ERCC3P19447 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ERCC3P19447 AL035456.1-201ENST00000456064 1369 ntBASIC18.96■□□□□ 0.63
ERCC3P19447 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ERCC3P19447 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ERCC3P19447 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.96■□□□□ 0.63
ERCC3P19447 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.96■□□□□ 0.63
ERCC3P19447 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ERCC3P19447 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ERCC3P19447 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
ERCC3P19447 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
ERCC3P19447 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
ERCC3P19447 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ERCC3P19447 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ERCC3P19447 FAM220BP-201ENST00000377689 816 ntBASIC18.96■□□□□ 0.63
ERCC3P19447 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ERCC3P19447 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
ERCC3P19447 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC18.96■□□□□ 0.63
ERCC3P19447 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC18.96■□□□□ 0.63
ERCC3P19447 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC18.96■□□□□ 0.63
ERCC3P19447 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC18.96■□□□□ 0.63
ERCC3P19447 AC004233.3-201ENST00000607794 1269 ntBASIC18.96■□□□□ 0.63
ERCC3P19447 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ERCC3P19447 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms