Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.66■□□□□ 0.42
SYN1P17600 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC17.66■□□□□ 0.42
SYN1P17600 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SYN1P17600 KRT8P39-201ENST00000396270 1433 ntBASIC17.66■□□□□ 0.42
SYN1P17600 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
SYN1P17600 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SYN1P17600 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SYN1P17600 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SYN1P17600 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SYN1P17600 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC17.66■□□□□ 0.42
SYN1P17600 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC17.66■□□□□ 0.42
SYN1P17600 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC17.66■□□□□ 0.42
SYN1P17600 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC17.66■□□□□ 0.42
SYN1P17600 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SYN1P17600 MIR5572-201ENST00000583188 137 ntBASIC17.66■□□□□ 0.42
SYN1P17600 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC17.66■□□□□ 0.42
SYN1P17600 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC17.66■□□□□ 0.42
SYN1P17600 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC17.66■□□□□ 0.42
SYN1P17600 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC17.66■□□□□ 0.42
SYN1P17600 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC17.66■□□□□ 0.42
SYN1P17600 RHOXF1P1-202ENST00000635473 501 ntBASIC17.66■□□□□ 0.42
SYN1P17600 AC244452.3-201ENST00000636814 210 ntBASIC17.66■□□□□ 0.42
SYN1P17600 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SYN1P17600 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SYN1P17600 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SYN1P17600 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.66■□□□□ 0.42
SYN1P17600 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.66■□□□□ 0.42
SYN1P17600 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.66■□□□□ 0.42
SYN1P17600 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SYN1P17600 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SYN1P17600 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SYN1P17600 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SYN1P17600 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
SYN1P17600 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SYN1P17600 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SYN1P17600 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SYN1P17600 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SYN1P17600 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.65■□□□□ 0.42
SYN1P17600 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SYN1P17600 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SYN1P17600 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SYN1P17600 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
SYN1P17600 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.65■□□□□ 0.42
SYN1P17600 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
SYN1P17600 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SYN1P17600 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SYN1P17600 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SYN1P17600 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC17.65■□□□□ 0.42
SYN1P17600 BAATP1-201ENST00000412284 1225 ntBASIC17.65■□□□□ 0.42
SYN1P17600 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC17.65■□□□□ 0.42
SYN1P17600 UPF3AP2-201ENST00000457924 1132 ntBASIC17.65■□□□□ 0.42
SYN1P17600 AKR7A2P1-201ENST00000460134 915 ntBASIC17.65■□□□□ 0.42
SYN1P17600 FAM86LP-201ENST00000478302 853 ntBASIC17.65■□□□□ 0.42
SYN1P17600 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SYN1P17600 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SYN1P17600 MBP-227ENST00000526111 581 ntTSL 4 BASIC17.65■□□□□ 0.42
SYN1P17600 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
SYN1P17600 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC17.65■□□□□ 0.42
SYN1P17600 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC17.65■□□□□ 0.42
SYN1P17600 BRI3BPP1-201ENST00000594224 787 ntBASIC17.65■□□□□ 0.42
SYN1P17600 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
SYN1P17600 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SYN1P17600 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
SYN1P17600 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SYN1P17600 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
SYN1P17600 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
SYN1P17600 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SYN1P17600 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.65■□□□□ 0.42
SYN1P17600 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SYN1P17600 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
SYN1P17600 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
SYN1P17600 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
SYN1P17600 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.64■□□□□ 0.41
SYN1P17600 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SYN1P17600 SNX33P1-201ENST00000592116 1762 ntBASIC17.64■□□□□ 0.41
SYN1P17600 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
SYN1P17600 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SYN1P17600 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC17.64■□□□□ 0.41
SYN1P17600 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
SYN1P17600 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SYN1P17600 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SYN1P17600 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SYN1P17600 BTBD6P1-201ENST00000412176 1267 ntBASIC17.64■□□□□ 0.41
SYN1P17600 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC17.64■□□□□ 0.41
SYN1P17600 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SYN1P17600 FNTAP2-201ENST00000430308 634 ntBASIC17.64■□□□□ 0.41
SYN1P17600 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC17.64■□□□□ 0.41
SYN1P17600 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SYN1P17600 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SYN1P17600 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC17.64■□□□□ 0.41
SYN1P17600 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC17.64■□□□□ 0.41
SYN1P17600 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC17.64■□□□□ 0.41
SYN1P17600 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC17.64■□□□□ 0.41
SYN1P17600 AL049840.4-201ENST00000602422 811 ntBASIC17.64■□□□□ 0.41
SYN1P17600 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC17.64■□□□□ 0.41
SYN1P17600 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC17.64■□□□□ 0.41
SYN1P17600 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC17.64■□□□□ 0.41
SYN1P17600 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC17.64■□□□□ 0.41
SYN1P17600 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SYN1P17600 AC134312.5-201ENST00000568031 1313 ntBASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms