Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRKCAP17252 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRKCAP17252 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRKCAP17252 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRKCAP17252 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.28■□□□□ 0.04
PRKCAP17252 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRKCAP17252 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.28■□□□□ 0.04
PRKCAP17252 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRKCAP17252 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRKCAP17252 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
PRKCAP17252 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PRKCAP17252 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PRKCAP17252 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PRKCAP17252 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PRKCAP17252 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PRKCAP17252 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PRKCAP17252 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PRKCAP17252 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PRKCAP17252 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.27■□□□□ 0.04
PRKCAP17252 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.27■□□□□ 0.04
PRKCAP17252 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PRKCAP17252 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PRKCAP17252 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.27■□□□□ 0.04
PRKCAP17252 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PRKCAP17252 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
PRKCAP17252 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
PRKCAP17252 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.27■□□□□ 0.04
PRKCAP17252 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PRKCAP17252 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PRKCAP17252 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
PRKCAP17252 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
PRKCAP17252 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
PRKCAP17252 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PRKCAP17252 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PRKCAP17252 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.27■□□□□ 0.04
PRKCAP17252 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15.27■□□□□ 0.04
PRKCAP17252 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.27■□□□□ 0.04
PRKCAP17252 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.27■□□□□ 0.04
PRKCAP17252 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PRKCAP17252 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.27■□□□□ 0.04
PRKCAP17252 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.27■□□□□ 0.04
PRKCAP17252 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.27■□□□□ 0.04
PRKCAP17252 AC064836.3-201ENST00000607928 673 ntBASIC15.27■□□□□ 0.04
PRKCAP17252 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.27■□□□□ 0.04
PRKCAP17252 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.27■□□□□ 0.04
PRKCAP17252 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PRKCAP17252 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PRKCAP17252 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
PRKCAP17252 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PRKCAP17252 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
PRKCAP17252 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
PRKCAP17252 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
PRKCAP17252 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PRKCAP17252 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PRKCAP17252 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.27■□□□□ 0.03
PRKCAP17252 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
PRKCAP17252 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
PRKCAP17252 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
PRKCAP17252 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
PRKCAP17252 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PRKCAP17252 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PRKCAP17252 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.26■□□□□ 0.03
PRKCAP17252 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PRKCAP17252 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRKCAP17252 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRKCAP17252 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.26■□□□□ 0.03
PRKCAP17252 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRKCAP17252 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PRKCAP17252 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRKCAP17252 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
PRKCAP17252 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PRKCAP17252 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRKCAP17252 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRKCAP17252 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.26■□□□□ 0.03
PRKCAP17252 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRKCAP17252 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.26■□□□□ 0.03
PRKCAP17252 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRKCAP17252 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRKCAP17252 HCG4-201ENST00000418983 998 ntBASIC15.26■□□□□ 0.03
PRKCAP17252 AC007967.2-201ENST00000432613 625 ntBASIC15.26■□□□□ 0.03
PRKCAP17252 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.26■□□□□ 0.03
PRKCAP17252 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC15.26■□□□□ 0.03
PRKCAP17252 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC15.26■□□□□ 0.03
PRKCAP17252 AC087641.1-201ENST00000557561 1021 ntBASIC15.26■□□□□ 0.03
PRKCAP17252 AC096734.2-201ENST00000562054 433 ntBASIC15.26■□□□□ 0.03
PRKCAP17252 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.26■□□□□ 0.03
PRKCAP17252 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
PRKCAP17252 PIN1-206ENST00000587625 878 ntTSL 2 BASIC15.26■□□□□ 0.03
PRKCAP17252 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.26■□□□□ 0.03
PRKCAP17252 AC010507.1-201ENST00000633895 436 ntBASIC15.26■□□□□ 0.03
PRKCAP17252 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRKCAP17252 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PRKCAP17252 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PRKCAP17252 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRKCAP17252 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PRKCAP17252 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PRKCAP17252 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PRKCAP17252 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRKCAP17252 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.26■□□□□ 0.03
PRKCAP17252 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms