Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TOP1P11387 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TOP1P11387 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TOP1P11387 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TOP1P11387 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
TOP1P11387 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TOP1P11387 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TOP1P11387 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
TOP1P11387 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC19.28■□□□□ 0.68
TOP1P11387 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC19.28■□□□□ 0.68
TOP1P11387 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
TOP1P11387 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC19.28■□□□□ 0.68
TOP1P11387 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TOP1P11387 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TOP1P11387 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TOP1P11387 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC19.28■□□□□ 0.68
TOP1P11387 GCK-202ENST00000345378 2421 ntTSL 2 BASIC19.28■□□□□ 0.68
TOP1P11387 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC19.28■□□□□ 0.68
TOP1P11387 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
TOP1P11387 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TOP1P11387 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
TOP1P11387 PNMT-202ENST00000394246 821 ntTSL 2 BASIC19.28■□□□□ 0.68
TOP1P11387 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC19.28■□□□□ 0.68
TOP1P11387 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC19.28■□□□□ 0.68
TOP1P11387 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC19.28■□□□□ 0.68
TOP1P11387 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TOP1P11387 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC19.28■□□□□ 0.68
TOP1P11387 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TOP1P11387 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
TOP1P11387 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
TOP1P11387 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC19.28■□□□□ 0.68
TOP1P11387 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TOP1P11387 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC19.28■□□□□ 0.68
TOP1P11387 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TOP1P11387 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC19.27■□□□□ 0.68
TOP1P11387 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
TOP1P11387 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC19.27■□□□□ 0.68
TOP1P11387 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
TOP1P11387 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TOP1P11387 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
TOP1P11387 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
TOP1P11387 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TOP1P11387 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
TOP1P11387 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
TOP1P11387 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
TOP1P11387 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TOP1P11387 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TOP1P11387 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TOP1P11387 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC19.27■□□□□ 0.68
TOP1P11387 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC19.27■□□□□ 0.68
TOP1P11387 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC19.27■□□□□ 0.68
TOP1P11387 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC19.27■□□□□ 0.68
TOP1P11387 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC19.27■□□□□ 0.68
TOP1P11387 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
TOP1P11387 AC069262.1-201ENST00000539058 672 ntBASIC19.27■□□□□ 0.68
TOP1P11387 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC19.27■□□□□ 0.68
TOP1P11387 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TOP1P11387 AC015911.4-201ENST00000588022 1070 ntBASIC19.27■□□□□ 0.68
TOP1P11387 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC19.27■□□□□ 0.68
TOP1P11387 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
TOP1P11387 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC19.27■□□□□ 0.68
TOP1P11387 Z92544.3-201ENST00000624747 417 ntBASIC19.27■□□□□ 0.68
TOP1P11387 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
TOP1P11387 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
TOP1P11387 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC19.27■□□□□ 0.68
TOP1P11387 DOC2GP-204ENST00000639052 2548 ntBASIC19.27■□□□□ 0.68
TOP1P11387 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TOP1P11387 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
TOP1P11387 CES3-203ENST00000543856 3178 ntTSL 2 BASIC19.27■□□□□ 0.67
TOP1P11387 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
TOP1P11387 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TOP1P11387 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
TOP1P11387 GGT3P-204ENST00000453783 1664 ntBASIC19.27■□□□□ 0.67
TOP1P11387 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
TOP1P11387 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC19.26■□□□□ 0.67
TOP1P11387 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
TOP1P11387 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC19.26■□□□□ 0.67
TOP1P11387 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC19.26■□□□□ 0.67
TOP1P11387 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC19.26■□□□□ 0.67
TOP1P11387 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TOP1P11387 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TOP1P11387 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
TOP1P11387 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TOP1P11387 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TOP1P11387 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
TOP1P11387 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TOP1P11387 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TOP1P11387 PP14571-201ENST00000404327 934 ntTSL 2 BASIC19.26■□□□□ 0.67
TOP1P11387 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC19.26■□□□□ 0.67
TOP1P11387 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC19.26■□□□□ 0.67
TOP1P11387 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC19.26■□□□□ 0.67
TOP1P11387 CYMP-203ENST00000474680 1263 ntBASIC19.26■□□□□ 0.67
TOP1P11387 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
TOP1P11387 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC19.26■□□□□ 0.67
TOP1P11387 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC19.26■□□□□ 0.67
TOP1P11387 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TOP1P11387 VPS29-207ENST00000549970 818 ntTSL 3 BASIC19.26■□□□□ 0.67
TOP1P11387 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC19.26■□□□□ 0.67
TOP1P11387 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
TOP1P11387 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms