Protein–RNA interactions for Protein: P04035

HMGCR, 3-hydroxy-3-methylglutaryl-coenzyme A reductase, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCRP04035 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HMGCRP04035 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
HMGCRP04035 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMGCRP04035 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMGCRP04035 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC18.38■□□□□ 0.53
HMGCRP04035 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HMGCRP04035 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HMGCRP04035 GALT-202ENST00000450095 1280 ntTSL 2 BASIC18.38■□□□□ 0.53
HMGCRP04035 AL139010.1-201ENST00000454878 894 ntBASIC18.38■□□□□ 0.53
HMGCRP04035 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HMGCRP04035 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC18.38■□□□□ 0.53
HMGCRP04035 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HMGCRP04035 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC18.38■□□□□ 0.53
HMGCRP04035 USB1-203ENST00000539737 1212 ntTSL 2 BASIC18.38■□□□□ 0.53
HMGCRP04035 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
HMGCRP04035 AL583810.1-201ENST00000553344 1045 ntBASIC18.38■□□□□ 0.53
HMGCRP04035 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HMGCRP04035 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC18.38■□□□□ 0.53
HMGCRP04035 RARRES2P5-201ENST00000564013 466 ntBASIC18.38■□□□□ 0.53
HMGCRP04035 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC18.38■□□□□ 0.53
HMGCRP04035 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC18.38■□□□□ 0.53
HMGCRP04035 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC18.38■□□□□ 0.53
HMGCRP04035 AC233724.13-201ENST00000598383 410 ntBASIC18.38■□□□□ 0.53
HMGCRP04035 MIR6869-201ENST00000619434 62 ntBASIC18.38■□□□□ 0.53
HMGCRP04035 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC18.38■□□□□ 0.53
HMGCRP04035 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
HMGCRP04035 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
HMGCRP04035 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMGCRP04035 AC018665.1-201ENST00000622927 1362 ntBASIC18.38■□□□□ 0.53
HMGCRP04035 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMGCRP04035 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMGCRP04035 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.38■□□□□ 0.53
HMGCRP04035 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
HMGCRP04035 DEK-201ENST00000244776 1441 ntTSL 2 BASIC18.38■□□□□ 0.53
HMGCRP04035 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
HMGCRP04035 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC18.38■□□□□ 0.53
HMGCRP04035 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.38■□□□□ 0.53
HMGCRP04035 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
HMGCRP04035 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.38■□□□□ 0.53
HMGCRP04035 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMGCRP04035 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMGCRP04035 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HMGCRP04035 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMGCRP04035 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.38■□□□□ 0.53
HMGCRP04035 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
HMGCRP04035 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMGCRP04035 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.37■□□□□ 0.53
HMGCRP04035 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMGCRP04035 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
HMGCRP04035 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMGCRP04035 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
HMGCRP04035 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.37■□□□□ 0.53
HMGCRP04035 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
HMGCRP04035 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HMGCRP04035 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC18.37■□□□□ 0.53
HMGCRP04035 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.37■□□□□ 0.53
HMGCRP04035 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMGCRP04035 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMGCRP04035 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HMGCRP04035 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMGCRP04035 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMGCRP04035 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMGCRP04035 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.37■□□□□ 0.53
HMGCRP04035 AC092933.1-201ENST00000393644 945 ntBASIC18.37■□□□□ 0.53
HMGCRP04035 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMGCRP04035 MIR1908-201ENST00000410394 80 ntBASIC18.37■□□□□ 0.53
HMGCRP04035 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
HMGCRP04035 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC18.37■□□□□ 0.53
HMGCRP04035 PAM16-204ENST00000571941 674 ntTSL 3 BASIC18.37■□□□□ 0.53
HMGCRP04035 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC18.37■□□□□ 0.53
HMGCRP04035 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC18.37■□□□□ 0.53
HMGCRP04035 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HMGCRP04035 TECR-220ENST00000600083 1204 ntTSL 2 BASIC18.37■□□□□ 0.53
HMGCRP04035 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMGCRP04035 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HMGCRP04035 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMGCRP04035 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
HMGCRP04035 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMGCRP04035 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMGCRP04035 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC18.37■□□□□ 0.53
HMGCRP04035 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMGCRP04035 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMGCRP04035 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
HMGCRP04035 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HMGCRP04035 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HMGCRP04035 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMGCRP04035 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMGCRP04035 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMGCRP04035 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HMGCRP04035 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMGCRP04035 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMGCRP04035 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMGCRP04035 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HMGCRP04035 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMGCRP04035 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
HMGCRP04035 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMGCRP04035 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMGCRP04035 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMGCRP04035 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMGCRP04035 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms