Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VTNP04004 U82695.1-201ENST00000635752 1889 ntBASIC17.91■□□□□ 0.46
VTNP04004 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
VTNP04004 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VTNP04004 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VTNP04004 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
VTNP04004 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
VTNP04004 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
VTNP04004 REEP4-207ENST00000523293 913 ntTSL 3 BASIC17.91■□□□□ 0.46
VTNP04004 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC17.91■□□□□ 0.46
VTNP04004 AL512361.1-201ENST00000554200 418 ntBASIC17.91■□□□□ 0.46
VTNP04004 COQ9-214ENST00000567933 882 ntTSL 3 BASIC17.91■□□□□ 0.46
VTNP04004 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC17.91■□□□□ 0.46
VTNP04004 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC17.91■□□□□ 0.46
VTNP04004 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC17.91■□□□□ 0.46
VTNP04004 AC004840.1-201ENST00000636359 365 ntBASIC17.91■□□□□ 0.46
VTNP04004 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.91■□□□□ 0.46
VTNP04004 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
VTNP04004 AC005052.1-201ENST00000625181 2492 ntBASIC17.91■□□□□ 0.46
VTNP04004 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
VTNP04004 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
VTNP04004 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.91■□□□□ 0.46
VTNP04004 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VTNP04004 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.91■□□□□ 0.46
VTNP04004 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VTNP04004 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VTNP04004 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
VTNP04004 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.9■□□□□ 0.46
VTNP04004 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
VTNP04004 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
VTNP04004 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
VTNP04004 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
VTNP04004 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VTNP04004 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.9■□□□□ 0.46
VTNP04004 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC17.9■□□□□ 0.46
VTNP04004 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC17.9■□□□□ 0.46
VTNP04004 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
VTNP04004 GSAP-205ENST00000430584 600 ntTSL 5 BASIC17.9■□□□□ 0.46
VTNP04004 SPTLC1P1-201ENST00000447199 261 ntBASIC17.9■□□□□ 0.46
VTNP04004 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC17.9■□□□□ 0.46
VTNP04004 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
VTNP04004 PRR29-209ENST00000582540 967 ntTSL 2 BASIC17.9■□□□□ 0.46
VTNP04004 AC004233.3-201ENST00000607794 1269 ntBASIC17.9■□□□□ 0.46
VTNP04004 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VTNP04004 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
VTNP04004 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
VTNP04004 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC17.9■□□□□ 0.46
VTNP04004 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
VTNP04004 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC17.9■□□□□ 0.46
VTNP04004 FLJ38576-201ENST00000623820 2459 ntBASIC17.9■□□□□ 0.46
VTNP04004 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.9■□□□□ 0.46
VTNP04004 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.9■□□□□ 0.46
VTNP04004 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
VTNP04004 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
VTNP04004 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
VTNP04004 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.89■□□□□ 0.45
VTNP04004 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.89■□□□□ 0.45
VTNP04004 IMPDH1P4-201ENST00000445028 1534 ntBASIC17.89■□□□□ 0.45
VTNP04004 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.89■□□□□ 0.45
VTNP04004 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VTNP04004 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.89■□□□□ 0.45
VTNP04004 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
VTNP04004 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
VTNP04004 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
VTNP04004 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
VTNP04004 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VTNP04004 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC17.89■□□□□ 0.45
VTNP04004 CRB3P1-201ENST00000449338 276 ntBASIC17.89■□□□□ 0.45
VTNP04004 CFL1-212ENST00000531413 636 ntTSL 3 BASIC17.89■□□□□ 0.45
VTNP04004 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
VTNP04004 AC026979.3-201ENST00000607315 403 ntBASIC17.89■□□□□ 0.45
VTNP04004 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
VTNP04004 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.89■□□□□ 0.45
VTNP04004 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
VTNP04004 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VTNP04004 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
VTNP04004 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.89■□□□□ 0.45
VTNP04004 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
VTNP04004 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
VTNP04004 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VTNP04004 AC011676.5-201ENST00000624864 2660 ntBASIC17.89■□□□□ 0.45
VTNP04004 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.89■□□□□ 0.45
VTNP04004 AC026471.1-201ENST00000564629 3026 ntBASIC17.89■□□□□ 0.45
VTNP04004 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VTNP04004 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
VTNP04004 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
VTNP04004 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.89■□□□□ 0.45
VTNP04004 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VTNP04004 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
VTNP04004 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VTNP04004 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VTNP04004 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
VTNP04004 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
VTNP04004 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.88■□□□□ 0.45
VTNP04004 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
VTNP04004 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VTNP04004 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VTNP04004 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.88■□□□□ 0.45
VTNP04004 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
VTNP04004 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms