Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.72■□□□□ 0.43
CHRNA1P02708 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHRNA1P02708 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHRNA1P02708 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHRNA1P02708 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CHRNA1P02708 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.72■□□□□ 0.43
CHRNA1P02708 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHRNA1P02708 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHRNA1P02708 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHRNA1P02708 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHRNA1P02708 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHRNA1P02708 AC078925.2-201ENST00000624013 1973 ntBASIC17.71■□□□□ 0.43
CHRNA1P02708 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.71■□□□□ 0.43
CHRNA1P02708 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHRNA1P02708 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHRNA1P02708 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CHRNA1P02708 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHRNA1P02708 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.71■□□□□ 0.43
CHRNA1P02708 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHRNA1P02708 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHRNA1P02708 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CHRNA1P02708 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.71■□□□□ 0.43
CHRNA1P02708 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.71■□□□□ 0.43
CHRNA1P02708 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHRNA1P02708 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHRNA1P02708 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
CHRNA1P02708 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC17.71■□□□□ 0.43
CHRNA1P02708 MEP1AP4-201ENST00000423244 1087 ntBASIC17.71■□□□□ 0.43
CHRNA1P02708 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC17.71■□□□□ 0.43
CHRNA1P02708 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHRNA1P02708 ELK1P1-201ENST00000485699 580 ntBASIC17.71■□□□□ 0.43
CHRNA1P02708 AC011495.1-201ENST00000498085 584 ntBASIC17.71■□□□□ 0.43
CHRNA1P02708 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CHRNA1P02708 IGHV3-71-201ENST00000523324 359 ntBASIC17.71■□□□□ 0.43
CHRNA1P02708 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC17.71■□□□□ 0.43
CHRNA1P02708 AC092337.1-201ENST00000568699 1129 ntBASIC17.71■□□□□ 0.43
CHRNA1P02708 AC025048.3-201ENST00000590609 569 ntBASIC17.71■□□□□ 0.43
CHRNA1P02708 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CHRNA1P02708 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHRNA1P02708 AC005702.4-201ENST00000618393 416 ntBASIC17.71■□□□□ 0.43
CHRNA1P02708 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHRNA1P02708 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CHRNA1P02708 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHRNA1P02708 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17.71■□□□□ 0.43
CHRNA1P02708 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHRNA1P02708 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHRNA1P02708 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHRNA1P02708 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHRNA1P02708 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHRNA1P02708 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHRNA1P02708 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CHRNA1P02708 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
CHRNA1P02708 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.71■□□□□ 0.42
CHRNA1P02708 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHRNA1P02708 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
CHRNA1P02708 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHRNA1P02708 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CHRNA1P02708 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CHRNA1P02708 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CHRNA1P02708 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHRNA1P02708 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC17.7■□□□□ 0.42
CHRNA1P02708 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHRNA1P02708 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHRNA1P02708 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHRNA1P02708 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.7■□□□□ 0.42
CHRNA1P02708 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
CHRNA1P02708 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHRNA1P02708 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHRNA1P02708 AC079776.1-201ENST00000401540 1152 ntBASIC17.7■□□□□ 0.42
CHRNA1P02708 FO393414.2-201ENST00000405153 598 ntBASIC17.7■□□□□ 0.42
CHRNA1P02708 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC17.7■□□□□ 0.42
CHRNA1P02708 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC17.7■□□□□ 0.42
CHRNA1P02708 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC17.7■□□□□ 0.42
CHRNA1P02708 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC17.7■□□□□ 0.42
CHRNA1P02708 AC123567.1-201ENST00000548294 1261 ntBASIC17.7■□□□□ 0.42
CHRNA1P02708 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC17.7■□□□□ 0.42
CHRNA1P02708 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC17.7■□□□□ 0.42
CHRNA1P02708 IFT20-216ENST00000588477 774 ntTSL 5 BASIC17.7■□□□□ 0.42
CHRNA1P02708 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC17.7■□□□□ 0.42
CHRNA1P02708 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.7■□□□□ 0.42
CHRNA1P02708 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CHRNA1P02708 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC17.7■□□□□ 0.42
CHRNA1P02708 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CHRNA1P02708 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.7■□□□□ 0.42
CHRNA1P02708 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
CHRNA1P02708 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.7■□□□□ 0.42
CHRNA1P02708 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHRNA1P02708 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CHRNA1P02708 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CHRNA1P02708 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNA1P02708 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.69■□□□□ 0.42
CHRNA1P02708 HLA-A-202ENST00000376806 1854 ntBASIC17.69■□□□□ 0.42
CHRNA1P02708 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNA1P02708 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNA1P02708 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNA1P02708 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CHRNA1P02708 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CHRNA1P02708 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNA1P02708 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.69■□□□□ 0.42
CHRNA1P02708 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms