Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
PDGFBP01127 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDGFBP01127 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDGFBP01127 AC091046.1-201ENST00000331871 207 ntBASIC16.29■□□□□ 0.2
PDGFBP01127 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PDGFBP01127 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
PDGFBP01127 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDGFBP01127 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC16.29■□□□□ 0.2
PDGFBP01127 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC16.29■□□□□ 0.2
PDGFBP01127 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC16.29■□□□□ 0.2
PDGFBP01127 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.29■□□□□ 0.2
PDGFBP01127 LDHBP1-201ENST00000455730 1119 ntBASIC16.29■□□□□ 0.2
PDGFBP01127 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC16.29■□□□□ 0.2
PDGFBP01127 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC16.29■□□□□ 0.2
PDGFBP01127 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
PDGFBP01127 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.29■□□□□ 0.2
PDGFBP01127 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC16.29■□□□□ 0.2
PDGFBP01127 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.29■□□□□ 0.2
PDGFBP01127 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC16.29■□□□□ 0.2
PDGFBP01127 MIR5572-201ENST00000583188 137 ntBASIC16.29■□□□□ 0.2
PDGFBP01127 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC16.29■□□□□ 0.2
PDGFBP01127 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
PDGFBP01127 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDGFBP01127 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC16.29■□□□□ 0.2
PDGFBP01127 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.29■□□□□ 0.2
PDGFBP01127 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
PDGFBP01127 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDGFBP01127 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
PDGFBP01127 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PDGFBP01127 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDGFBP01127 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDGFBP01127 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
PDGFBP01127 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDGFBP01127 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDGFBP01127 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDGFBP01127 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
PDGFBP01127 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDGFBP01127 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDGFBP01127 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDGFBP01127 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDGFBP01127 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
PDGFBP01127 TUBB8P12-201ENST00000308911 1335 ntBASIC16.28■□□□□ 0.2
PDGFBP01127 TUBB7P-202ENST00000428444 1305 ntBASIC16.28■□□□□ 0.2
PDGFBP01127 TUBB8P7-204ENST00000567960 1332 ntBASIC16.28■□□□□ 0.2
PDGFBP01127 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.28■□□□□ 0.2
PDGFBP01127 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDGFBP01127 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PDGFBP01127 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PDGFBP01127 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PDGFBP01127 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.28■□□□□ 0.2
PDGFBP01127 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.28■□□□□ 0.2
PDGFBP01127 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDGFBP01127 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDGFBP01127 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDGFBP01127 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDGFBP01127 NUS1P3-201ENST00000423502 862 ntBASIC16.28■□□□□ 0.2
PDGFBP01127 AC134915.1-201ENST00000426461 574 ntBASIC16.28■□□□□ 0.2
PDGFBP01127 FNTAP2-201ENST00000430308 634 ntBASIC16.28■□□□□ 0.2
PDGFBP01127 AC007969.1-201ENST00000433675 447 ntBASIC16.28■□□□□ 0.2
PDGFBP01127 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PDGFBP01127 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC16.28■□□□□ 0.2
PDGFBP01127 RPL8-205ENST00000527914 551 ntTSL 3 BASIC16.28■□□□□ 0.2
PDGFBP01127 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC16.28■□□□□ 0.2
PDGFBP01127 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC16.28■□□□□ 0.2
PDGFBP01127 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC16.28■□□□□ 0.2
PDGFBP01127 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC16.28■□□□□ 0.2
PDGFBP01127 AL008638.5-201ENST00000623814 1298 ntBASIC16.28■□□□□ 0.2
PDGFBP01127 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC16.28■□□□□ 0.2
PDGFBP01127 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDGFBP01127 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.28■□□□□ 0.2
PDGFBP01127 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PDGFBP01127 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PDGFBP01127 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
PDGFBP01127 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDGFBP01127 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDGFBP01127 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
PDGFBP01127 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PDGFBP01127 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PDGFBP01127 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
PDGFBP01127 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PDGFBP01127 INTS4P2-202ENST00000614726 2019 ntBASIC16.28■□□□□ 0.2
PDGFBP01127 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PDGFBP01127 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.28■□□□□ 0.2
PDGFBP01127 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.27■□□□□ 0.2
PDGFBP01127 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PDGFBP01127 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PDGFBP01127 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PDGFBP01127 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PDGFBP01127 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PDGFBP01127 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.27■□□□□ 0.2
PDGFBP01127 AC098818.2-201ENST00000564925 2320 ntBASIC16.27■□□□□ 0.2
PDGFBP01127 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
PDGFBP01127 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
PDGFBP01127 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PDGFBP01127 BTBD6P1-201ENST00000412176 1267 ntBASIC16.27■□□□□ 0.2
PDGFBP01127 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC16.27■□□□□ 0.2
PDGFBP01127 SOCS2P1-201ENST00000417727 557 ntBASIC16.27■□□□□ 0.2
PDGFBP01127 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC16.27■□□□□ 0.2
PDGFBP01127 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PDGFBP01127 AC012441.1-201ENST00000446669 685 ntBASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms