Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC18.95■□□□□ 0.62
CTDNEP1O95476 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC18.95■□□□□ 0.62
CTDNEP1O95476 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC18.95■□□□□ 0.62
CTDNEP1O95476 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.95■□□□□ 0.62
CTDNEP1O95476 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC18.95■□□□□ 0.62
CTDNEP1O95476 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CTDNEP1O95476 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC18.95■□□□□ 0.62
CTDNEP1O95476 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CTDNEP1O95476 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC18.95■□□□□ 0.62
CTDNEP1O95476 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CTDNEP1O95476 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CTDNEP1O95476 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CTDNEP1O95476 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CTDNEP1O95476 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CTDNEP1O95476 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CTDNEP1O95476 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CTDNEP1O95476 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CTDNEP1O95476 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTDNEP1O95476 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CTDNEP1O95476 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTDNEP1O95476 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTDNEP1O95476 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTDNEP1O95476 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTDNEP1O95476 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
CTDNEP1O95476 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC18.94■□□□□ 0.62
CTDNEP1O95476 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CTDNEP1O95476 AL139384.1-201ENST00000612143 3047 ntBASIC18.94■□□□□ 0.62
CTDNEP1O95476 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CTDNEP1O95476 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CTDNEP1O95476 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CTDNEP1O95476 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
CTDNEP1O95476 OR6D1P-202ENST00000641007 5290 ntBASIC18.94■□□□□ 0.62
CTDNEP1O95476 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTDNEP1O95476 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTDNEP1O95476 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CTDNEP1O95476 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTDNEP1O95476 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC18.94■□□□□ 0.62
CTDNEP1O95476 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTDNEP1O95476 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC18.94■□□□□ 0.62
CTDNEP1O95476 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC18.94■□□□□ 0.62
CTDNEP1O95476 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC18.94■□□□□ 0.62
CTDNEP1O95476 ALG1L5P-201ENST00000482043 771 ntBASIC18.94■□□□□ 0.62
CTDNEP1O95476 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC18.94■□□□□ 0.62
CTDNEP1O95476 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC18.94■□□□□ 0.62
CTDNEP1O95476 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC18.94■□□□□ 0.62
CTDNEP1O95476 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC18.94■□□□□ 0.62
CTDNEP1O95476 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC18.94■□□□□ 0.62
CTDNEP1O95476 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC18.94■□□□□ 0.62
CTDNEP1O95476 CITED2-204ENST00000618718 901 ntTSL 2 BASIC18.94■□□□□ 0.62
CTDNEP1O95476 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC18.94■□□□□ 0.62
CTDNEP1O95476 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
CTDNEP1O95476 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
CTDNEP1O95476 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC18.94■□□□□ 0.62
CTDNEP1O95476 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTDNEP1O95476 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC18.94■□□□□ 0.62
CTDNEP1O95476 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
CTDNEP1O95476 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CTDNEP1O95476 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CTDNEP1O95476 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
CTDNEP1O95476 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTDNEP1O95476 AKAP8P1-201ENST00000434743 1349 ntBASIC18.94■□□□□ 0.62
CTDNEP1O95476 PMS2P7-201ENST00000506558 1336 ntBASIC18.94■□□□□ 0.62
CTDNEP1O95476 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC18.94■□□□□ 0.62
CTDNEP1O95476 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTDNEP1O95476 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC18.94■□□□□ 0.62
CTDNEP1O95476 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CTDNEP1O95476 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC18.94■□□□□ 0.62
CTDNEP1O95476 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC18.93■□□□□ 0.62
CTDNEP1O95476 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CTDNEP1O95476 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC18.93■□□□□ 0.62
CTDNEP1O95476 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CTDNEP1O95476 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CTDNEP1O95476 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC18.93■□□□□ 0.62
CTDNEP1O95476 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CTDNEP1O95476 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CTDNEP1O95476 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CTDNEP1O95476 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC18.93■□□□□ 0.62
CTDNEP1O95476 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CTDNEP1O95476 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CTDNEP1O95476 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC18.93■□□□□ 0.62
CTDNEP1O95476 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CTDNEP1O95476 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CTDNEP1O95476 AC142381.1-201ENST00000426099 345 ntBASIC18.93■□□□□ 0.62
CTDNEP1O95476 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CTDNEP1O95476 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC18.93■□□□□ 0.62
CTDNEP1O95476 SSH2-211ENST00000590153 570 ntTSL 4 BASIC18.93■□□□□ 0.62
CTDNEP1O95476 MIR4321-201ENST00000592276 80 ntBASIC18.93■□□□□ 0.62
CTDNEP1O95476 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC18.93■□□□□ 0.62
CTDNEP1O95476 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CTDNEP1O95476 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CTDNEP1O95476 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CTDNEP1O95476 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC18.93■□□□□ 0.62
CTDNEP1O95476 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CTDNEP1O95476 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CTDNEP1O95476 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CTDNEP1O95476 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CTDNEP1O95476 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CTDNEP1O95476 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC18.92■□□□□ 0.62
CTDNEP1O95476 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.92■□□□□ 0.62
CTDNEP1O95476 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms