Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
LRCH4O75427 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LRCH4O75427 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRCH4O75427 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
LRCH4O75427 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC17.06■□□□□ 0.32
LRCH4O75427 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.06■□□□□ 0.32
LRCH4O75427 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRCH4O75427 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRCH4O75427 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.06■□□□□ 0.32
LRCH4O75427 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRCH4O75427 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRCH4O75427 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
LRCH4O75427 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRCH4O75427 MIR648-201ENST00000385046 94 ntBASIC17.06■□□□□ 0.32
LRCH4O75427 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.06■□□□□ 0.32
LRCH4O75427 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.06■□□□□ 0.32
LRCH4O75427 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.06■□□□□ 0.32
LRCH4O75427 POLD2P1-201ENST00000511220 997 ntBASIC17.06■□□□□ 0.32
LRCH4O75427 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.06■□□□□ 0.32
LRCH4O75427 PRYP6-201ENST00000514804 343 ntBASIC17.06■□□□□ 0.32
LRCH4O75427 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.06■□□□□ 0.32
LRCH4O75427 AC040169.1-201ENST00000565382 521 ntBASIC17.06■□□□□ 0.32
LRCH4O75427 RARRES2P8-201ENST00000566335 367 ntBASIC17.06■□□□□ 0.32
LRCH4O75427 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.06■□□□□ 0.32
LRCH4O75427 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.06■□□□□ 0.32
LRCH4O75427 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LRCH4O75427 AC132872.4-202ENST00000622924 2756 ntBASIC17.06■□□□□ 0.32
LRCH4O75427 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
LRCH4O75427 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.06■□□□□ 0.32
LRCH4O75427 LINC02447-202ENST00000501888 2146 ntBASIC17.06■□□□□ 0.32
LRCH4O75427 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRCH4O75427 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.06■□□□□ 0.32
LRCH4O75427 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRCH4O75427 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LRCH4O75427 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.06■□□□□ 0.32
LRCH4O75427 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.06■□□□□ 0.32
LRCH4O75427 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRCH4O75427 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LRCH4O75427 CICP6-201ENST00000457191 2729 ntBASIC17.05■□□□□ 0.32
LRCH4O75427 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRCH4O75427 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRCH4O75427 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRCH4O75427 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.05■□□□□ 0.32
LRCH4O75427 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
LRCH4O75427 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRCH4O75427 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
LRCH4O75427 AC069224.1-201ENST00000566372 1715 ntBASIC17.05■□□□□ 0.32
LRCH4O75427 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRCH4O75427 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRCH4O75427 AL355306.1-201ENST00000415580 579 ntBASIC17.05■□□□□ 0.32
LRCH4O75427 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LRCH4O75427 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.05■□□□□ 0.32
LRCH4O75427 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.05■□□□□ 0.32
LRCH4O75427 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRCH4O75427 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.05■□□□□ 0.32
LRCH4O75427 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRCH4O75427 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LRCH4O75427 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.05■□□□□ 0.32
LRCH4O75427 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
LRCH4O75427 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
LRCH4O75427 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LRCH4O75427 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LRCH4O75427 AL589702.1-201ENST00000641229 1509 ntBASIC17.05■□□□□ 0.32
LRCH4O75427 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRCH4O75427 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRCH4O75427 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.05■□□□□ 0.32
LRCH4O75427 AC112504.1-201ENST00000623415 1841 ntBASIC17.05■□□□□ 0.32
LRCH4O75427 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LRCH4O75427 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.05■□□□□ 0.32
LRCH4O75427 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LRCH4O75427 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRCH4O75427 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRCH4O75427 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.04■□□□□ 0.32
LRCH4O75427 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LRCH4O75427 PAUPAR-201ENST00000630360 2965 ntBASIC17.04■□□□□ 0.32
LRCH4O75427 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
LRCH4O75427 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.04■□□□□ 0.32
LRCH4O75427 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LRCH4O75427 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.04■□□□□ 0.32
LRCH4O75427 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRCH4O75427 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17.04■□□□□ 0.32
LRCH4O75427 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRCH4O75427 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC17.04■□□□□ 0.32
LRCH4O75427 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.04■□□□□ 0.32
LRCH4O75427 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRCH4O75427 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LRCH4O75427 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRCH4O75427 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LRCH4O75427 MCCD1P2-201ENST00000423228 335 ntBASIC17.04■□□□□ 0.32
LRCH4O75427 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.04■□□□□ 0.32
LRCH4O75427 ADH5P3-201ENST00000433842 1137 ntBASIC17.04■□□□□ 0.32
LRCH4O75427 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LRCH4O75427 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.04■□□□□ 0.32
LRCH4O75427 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.04■□□□□ 0.32
LRCH4O75427 AL138918.1-201ENST00000568306 659 ntBASIC17.04■□□□□ 0.32
LRCH4O75427 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.04■□□□□ 0.32
LRCH4O75427 AC002347.1-201ENST00000569543 541 ntBASIC17.04■□□□□ 0.32
LRCH4O75427 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.04■□□□□ 0.32
LRCH4O75427 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.04■□□□□ 0.32
LRCH4O75427 GPALPP1-207ENST00000611650 899 ntBASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms