Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 AC145423.3-201ENST00000615987 467 ntBASIC15.74■□□□□ 0.11
GFRA3O60609 AC005252.2-201ENST00000624630 1141 ntBASIC15.74■□□□□ 0.11
GFRA3O60609 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
GFRA3O60609 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
GFRA3O60609 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
GFRA3O60609 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
GFRA3O60609 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC15.74■□□□□ 0.11
GFRA3O60609 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC15.74■□□□□ 0.11
GFRA3O60609 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
GFRA3O60609 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC15.74■□□□□ 0.11
GFRA3O60609 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
GFRA3O60609 LYSMD4-203ENST00000378904 2122 ntBASIC15.74■□□□□ 0.11
GFRA3O60609 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
GFRA3O60609 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
GFRA3O60609 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
GFRA3O60609 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
GFRA3O60609 RERG-209ENST00000546331 1383 ntTSL 2 BASIC15.74■□□□□ 0.11
GFRA3O60609 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
GFRA3O60609 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
GFRA3O60609 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
GFRA3O60609 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
GFRA3O60609 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
GFRA3O60609 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC15.73■□□□□ 0.11
GFRA3O60609 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
GFRA3O60609 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
GFRA3O60609 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.73■□□□□ 0.11
GFRA3O60609 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
GFRA3O60609 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC15.73■□□□□ 0.11
GFRA3O60609 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
GFRA3O60609 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
GFRA3O60609 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
GFRA3O60609 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC15.73■□□□□ 0.11
GFRA3O60609 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC15.73■□□□□ 0.11
GFRA3O60609 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC15.73■□□□□ 0.11
GFRA3O60609 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
GFRA3O60609 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
GFRA3O60609 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
GFRA3O60609 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
GFRA3O60609 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
GFRA3O60609 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
GFRA3O60609 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC15.73■□□□□ 0.11
GFRA3O60609 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
GFRA3O60609 AL627389.1-201ENST00000413508 1182 ntBASIC15.73■□□□□ 0.11
GFRA3O60609 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC15.73■□□□□ 0.11
GFRA3O60609 FAM197Y7-201ENST00000432892 766 ntBASIC15.73■□□□□ 0.11
GFRA3O60609 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC15.73■□□□□ 0.11
GFRA3O60609 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC15.73■□□□□ 0.11
GFRA3O60609 AC125604.1-201ENST00000496255 707 ntBASIC15.73■□□□□ 0.11
GFRA3O60609 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC15.73■□□□□ 0.11
GFRA3O60609 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC15.73■□□□□ 0.11
GFRA3O60609 AC078819.1-201ENST00000547454 765 ntBASIC15.73■□□□□ 0.11
GFRA3O60609 AC012085.1-201ENST00000548270 765 ntBASIC15.73■□□□□ 0.11
GFRA3O60609 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC15.73■□□□□ 0.11
GFRA3O60609 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC15.73■□□□□ 0.11
GFRA3O60609 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
GFRA3O60609 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
GFRA3O60609 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
GFRA3O60609 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
GFRA3O60609 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC15.73■□□□□ 0.11
GFRA3O60609 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC15.73■□□□□ 0.11
GFRA3O60609 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
GFRA3O60609 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.73■□□□□ 0.11
GFRA3O60609 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
GFRA3O60609 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
GFRA3O60609 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC15.73■□□□□ 0.11
GFRA3O60609 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
GFRA3O60609 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
GFRA3O60609 Z97205.2-201ENST00000564697 1639 ntBASIC15.72■□□□□ 0.11
GFRA3O60609 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
GFRA3O60609 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC15.72■□□□□ 0.11
GFRA3O60609 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
GFRA3O60609 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
GFRA3O60609 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
GFRA3O60609 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC15.72■□□□□ 0.11
GFRA3O60609 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC15.72■□□□□ 0.11
GFRA3O60609 STK4-201ENST00000372801 2038 ntTSL 2 BASIC15.72■□□□□ 0.11
GFRA3O60609 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.72■□□□□ 0.11
GFRA3O60609 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.72■□□□□ 0.11
GFRA3O60609 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
GFRA3O60609 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC15.72■□□□□ 0.11
GFRA3O60609 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
GFRA3O60609 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
GFRA3O60609 AC007274.2-201ENST00000421675 662 ntBASIC15.72■□□□□ 0.11
GFRA3O60609 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC15.72■□□□□ 0.11
GFRA3O60609 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
GFRA3O60609 AL596276.2-201ENST00000447525 331 ntBASIC15.72■□□□□ 0.11
GFRA3O60609 RN7SL8P-201ENST00000461771 266 ntBASIC15.72■□□□□ 0.11
GFRA3O60609 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
GFRA3O60609 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
GFRA3O60609 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC15.72■□□□□ 0.11
GFRA3O60609 AC135983.4-201ENST00000564116 1262 ntBASIC15.72■□□□□ 0.11
GFRA3O60609 AC025279.2-201ENST00000569730 653 ntBASIC15.72■□□□□ 0.11
GFRA3O60609 CYGB-203ENST00000589145 788 ntTSL 3 BASIC15.72■□□□□ 0.11
GFRA3O60609 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.72■□□□□ 0.11
GFRA3O60609 AC009948.4-201ENST00000604692 675 ntBASIC15.72■□□□□ 0.11
GFRA3O60609 AP000240.1-201ENST00000609910 452 ntBASIC15.72■□□□□ 0.11
GFRA3O60609 DIO1-215ENST00000610607 796 ntTSL 5 BASIC15.72■□□□□ 0.11
GFRA3O60609 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
GFRA3O60609 AC091544.8-201ENST00000619490 361 ntBASIC15.72■□□□□ 0.11
GFRA3O60609 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms