Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC17.03■□□□□ 0.32
MSI1O43347 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC17.03■□□□□ 0.32
MSI1O43347 AC098859.1-201ENST00000502915 1238 ntBASIC17.03■□□□□ 0.32
MSI1O43347 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.03■□□□□ 0.32
MSI1O43347 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.03■□□□□ 0.32
MSI1O43347 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.03■□□□□ 0.32
MSI1O43347 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.03■□□□□ 0.32
MSI1O43347 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MSI1O43347 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.03■□□□□ 0.32
MSI1O43347 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
MSI1O43347 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MSI1O43347 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MSI1O43347 PCDH8P1-201ENST00000428983 2773 ntBASIC17.03■□□□□ 0.32
MSI1O43347 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
MSI1O43347 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
MSI1O43347 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MSI1O43347 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
MSI1O43347 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
MSI1O43347 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
MSI1O43347 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
MSI1O43347 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
MSI1O43347 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MSI1O43347 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
MSI1O43347 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
MSI1O43347 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
MSI1O43347 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
MSI1O43347 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
MSI1O43347 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.02■□□□□ 0.32
MSI1O43347 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
MSI1O43347 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
MSI1O43347 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
MSI1O43347 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
MSI1O43347 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
MSI1O43347 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
MSI1O43347 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.02■□□□□ 0.32
MSI1O43347 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
MSI1O43347 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.02■□□□□ 0.32
MSI1O43347 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
MSI1O43347 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.02■□□□□ 0.32
MSI1O43347 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
MSI1O43347 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
MSI1O43347 HLA-H-201ENST00000383620 1096 ntBASIC17.02■□□□□ 0.32
MSI1O43347 PNMT-202ENST00000394246 821 ntTSL 2 BASIC17.02■□□□□ 0.32
MSI1O43347 RNA5SP410-201ENST00000516285 106 ntBASIC17.02■□□□□ 0.32
MSI1O43347 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.02■□□□□ 0.32
MSI1O43347 AC069262.1-201ENST00000539058 672 ntBASIC17.02■□□□□ 0.32
MSI1O43347 AL512356.2-201ENST00000546955 174 ntBASIC17.02■□□□□ 0.32
MSI1O43347 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.02■□□□□ 0.32
MSI1O43347 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
MSI1O43347 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.02■□□□□ 0.32
MSI1O43347 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC17.02■□□□□ 0.32
MSI1O43347 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.02■□□□□ 0.32
MSI1O43347 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
MSI1O43347 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.02■□□□□ 0.32
MSI1O43347 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
MSI1O43347 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
MSI1O43347 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.32
MSI1O43347 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.32
MSI1O43347 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
MSI1O43347 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.02■□□□□ 0.31
MSI1O43347 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
MSI1O43347 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
MSI1O43347 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
MSI1O43347 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
MSI1O43347 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
MSI1O43347 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MSI1O43347 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
MSI1O43347 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
MSI1O43347 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.01■□□□□ 0.31
MSI1O43347 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MSI1O43347 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.01■□□□□ 0.31
MSI1O43347 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MSI1O43347 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
MSI1O43347 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MSI1O43347 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC17.01■□□□□ 0.31
MSI1O43347 CNN2P2-201ENST00000443536 909 ntBASIC17.01■□□□□ 0.31
MSI1O43347 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC17.01■□□□□ 0.31
MSI1O43347 FAM86GP-201ENST00000448322 971 ntBASIC17.01■□□□□ 0.31
MSI1O43347 CNN2P3-201ENST00000450201 906 ntBASIC17.01■□□□□ 0.31
MSI1O43347 CYMP-203ENST00000474680 1263 ntBASIC17.01■□□□□ 0.31
MSI1O43347 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MSI1O43347 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.01■□□□□ 0.31
MSI1O43347 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.01■□□□□ 0.31
MSI1O43347 MIR4453-201ENST00000584019 89 ntBASIC17.01■□□□□ 0.31
MSI1O43347 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.01■□□□□ 0.31
MSI1O43347 AC093512.1-201ENST00000617969 520 ntBASIC17.01■□□□□ 0.31
MSI1O43347 AL136317.3-201ENST00000618497 906 ntBASIC17.01■□□□□ 0.31
MSI1O43347 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MSI1O43347 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC17.01■□□□□ 0.31
MSI1O43347 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
MSI1O43347 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MSI1O43347 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
MSI1O43347 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MSI1O43347 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.01■□□□□ 0.31
MSI1O43347 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MSI1O43347 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MSI1O43347 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
MSI1O43347 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
MSI1O43347 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.01■□□□□ 0.31
MSI1O43347 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms