Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
MSH5O43196 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
MSH5O43196 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
MSH5O43196 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC22.85■■□□□ 1.25
MSH5O43196 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC22.85■■□□□ 1.25
MSH5O43196 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC22.85■■□□□ 1.25
MSH5O43196 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC22.85■■□□□ 1.25
MSH5O43196 UBE2V1P6-201ENST00000430840 422 ntBASIC22.85■■□□□ 1.25
MSH5O43196 AC090680.1-201ENST00000464696 860 ntBASIC22.85■■□□□ 1.25
MSH5O43196 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC22.85■■□□□ 1.25
MSH5O43196 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC22.85■■□□□ 1.25
MSH5O43196 OR8X1P-201ENST00000534542 869 ntBASIC22.85■■□□□ 1.25
MSH5O43196 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
MSH5O43196 AC006557.2-201ENST00000592985 1240 ntBASIC22.85■■□□□ 1.25
MSH5O43196 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC22.85■■□□□ 1.25
MSH5O43196 AC126175.1-201ENST00000617041 758 ntBASIC22.85■■□□□ 1.25
MSH5O43196 AL035661.1-201ENST00000620459 1144 ntBASIC22.85■■□□□ 1.25
MSH5O43196 AL022326.1-202ENST00000641533 845 ntBASIC22.85■■□□□ 1.25
MSH5O43196 AP000867.4-201ENST00000641616 219 ntBASIC22.85■■□□□ 1.25
MSH5O43196 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
MSH5O43196 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
MSH5O43196 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
MSH5O43196 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
MSH5O43196 AC002310.6-201ENST00000624451 1377 ntBASIC22.85■■□□□ 1.25
MSH5O43196 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
MSH5O43196 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
MSH5O43196 AC132872.4-202ENST00000622924 2756 ntBASIC22.84■■□□□ 1.25
MSH5O43196 AC106886.4-201ENST00000623557 2502 ntBASIC22.84■■□□□ 1.25
MSH5O43196 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
MSH5O43196 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
MSH5O43196 POR-209ENST00000439269 1858 ntTSL 2 BASIC22.84■■□□□ 1.25
MSH5O43196 AL024508.2-201ENST00000607749 1894 ntBASIC22.84■■□□□ 1.25
MSH5O43196 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC22.84■■□□□ 1.25
MSH5O43196 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
MSH5O43196 CTNS-203ENST00000399306 803 ntTSL 3 BASIC22.84■■□□□ 1.25
MSH5O43196 AL157702.2-201ENST00000428292 1223 ntTSL 3 BASIC22.84■■□□□ 1.25
MSH5O43196 VN1R108P-201ENST00000431580 830 ntBASIC22.84■■□□□ 1.25
MSH5O43196 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC22.84■■□□□ 1.25
MSH5O43196 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
MSH5O43196 CEND1P1-201ENST00000451006 455 ntBASIC22.84■■□□□ 1.25
MSH5O43196 COX20P2-201ENST00000452636 358 ntBASIC22.84■■□□□ 1.25
MSH5O43196 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC22.84■■□□□ 1.25
MSH5O43196 AC092656.1-202ENST00000515843 998 ntTSL 4 BASIC22.84■■□□□ 1.25
MSH5O43196 AC025252.1-201ENST00000535247 556 ntTSL 4 BASIC22.84■■□□□ 1.25
MSH5O43196 AC079315.1-201ENST00000602952 623 ntBASIC22.84■■□□□ 1.25
MSH5O43196 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC22.84■■□□□ 1.25
MSH5O43196 C20orf181-201ENST00000623918 480 ntBASIC22.84■■□□□ 1.25
MSH5O43196 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
MSH5O43196 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
MSH5O43196 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC22.84■■□□□ 1.25
MSH5O43196 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC22.84■■□□□ 1.25
MSH5O43196 AC100803.1-201ENST00000501440 1380 ntTSL 2 BASIC22.84■■□□□ 1.25
MSH5O43196 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
MSH5O43196 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
MSH5O43196 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
MSH5O43196 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
MSH5O43196 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
MSH5O43196 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
MSH5O43196 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
MSH5O43196 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
MSH5O43196 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.25
MSH5O43196 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC22.83■■□□□ 1.25
MSH5O43196 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
MSH5O43196 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
MSH5O43196 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
MSH5O43196 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
MSH5O43196 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
MSH5O43196 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
MSH5O43196 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
MSH5O43196 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
MSH5O43196 METTL26-205ENST00000397666 726 ntTSL 2 BASIC22.83■■□□□ 1.25
MSH5O43196 CRYGEP-201ENST00000412192 528 ntBASIC22.83■■□□□ 1.25
MSH5O43196 IP6K2-208ENST00000417896 1124 ntTSL 2 BASIC22.83■■□□□ 1.25
MSH5O43196 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC22.83■■□□□ 1.25
MSH5O43196 AC010153.1-201ENST00000432862 727 ntBASIC22.83■■□□□ 1.25
MSH5O43196 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC22.83■■□□□ 1.25
MSH5O43196 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
MSH5O43196 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC22.83■■□□□ 1.25
MSH5O43196 AC018845.2-201ENST00000568326 409 ntBASIC22.83■■□□□ 1.25
MSH5O43196 TCAP-202ENST00000578283 583 ntTSL 5 BASIC22.83■■□□□ 1.25
MSH5O43196 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC22.83■■□□□ 1.25
MSH5O43196 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC22.83■■□□□ 1.25
MSH5O43196 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
MSH5O43196 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
MSH5O43196 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
MSH5O43196 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC22.83■■□□□ 1.25
MSH5O43196 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
MSH5O43196 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC22.83■■□□□ 1.25
MSH5O43196 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.24
MSH5O43196 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
MSH5O43196 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC22.83■■□□□ 1.24
MSH5O43196 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC22.83■■□□□ 1.24
MSH5O43196 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.24
MSH5O43196 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
MSH5O43196 CA12-203ENST00000422263 2556 ntTSL 2 BASIC22.83■■□□□ 1.24
MSH5O43196 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
MSH5O43196 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
MSH5O43196 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
MSH5O43196 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
MSH5O43196 NT5C3A-214ENST00000620705 1704 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms