Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.28□□□□□ -0.12
PHF1O43189 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.28□□□□□ -0.12
PHF1O43189 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC14.28□□□□□ -0.12
PHF1O43189 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
PHF1O43189 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC14.28□□□□□ -0.12
PHF1O43189 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
PHF1O43189 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
PHF1O43189 AL590787.1-201ENST00000568856 1315 ntBASIC14.28□□□□□ -0.12
PHF1O43189 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
PHF1O43189 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC14.28□□□□□ -0.12
PHF1O43189 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC14.28□□□□□ -0.12
PHF1O43189 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PHF1O43189 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC14.28□□□□□ -0.12
PHF1O43189 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PHF1O43189 CYP2T1P-202ENST00000641596 2535 ntBASIC14.28□□□□□ -0.12
PHF1O43189 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PHF1O43189 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PHF1O43189 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
PHF1O43189 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.28□□□□□ -0.12
PHF1O43189 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC14.28□□□□□ -0.12
PHF1O43189 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PHF1O43189 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC14.28□□□□□ -0.12
PHF1O43189 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PHF1O43189 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
PHF1O43189 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
PHF1O43189 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.27□□□□□ -0.12
PHF1O43189 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PHF1O43189 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC14.27□□□□□ -0.12
PHF1O43189 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC14.27□□□□□ -0.12
PHF1O43189 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
PHF1O43189 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
PHF1O43189 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PHF1O43189 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
PHF1O43189 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PHF1O43189 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PHF1O43189 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PHF1O43189 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PHF1O43189 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PHF1O43189 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PHF1O43189 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.27□□□□□ -0.13
PHF1O43189 NABP1-203ENST00000409510 843 ntTSL 5 BASIC14.27□□□□□ -0.13
PHF1O43189 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC14.27□□□□□ -0.13
PHF1O43189 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC14.27□□□□□ -0.13
PHF1O43189 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC14.27□□□□□ -0.13
PHF1O43189 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC14.27□□□□□ -0.13
PHF1O43189 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC14.27□□□□□ -0.13
PHF1O43189 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PHF1O43189 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC14.27□□□□□ -0.13
PHF1O43189 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC14.27□□□□□ -0.13
PHF1O43189 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC14.27□□□□□ -0.13
PHF1O43189 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.27□□□□□ -0.13
PHF1O43189 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PHF1O43189 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PHF1O43189 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PHF1O43189 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC14.27□□□□□ -0.13
PHF1O43189 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
PHF1O43189 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC14.26□□□□□ -0.13
PHF1O43189 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PHF1O43189 HYMAI-201ENST00000635591 3347 ntBASIC14.26□□□□□ -0.13
PHF1O43189 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.26□□□□□ -0.13
PHF1O43189 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC14.26□□□□□ -0.13
PHF1O43189 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.26□□□□□ -0.13
PHF1O43189 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC14.26□□□□□ -0.13
PHF1O43189 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
PHF1O43189 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.26□□□□□ -0.13
PHF1O43189 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PHF1O43189 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PHF1O43189 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PHF1O43189 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
PHF1O43189 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
PHF1O43189 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PHF1O43189 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PHF1O43189 AC063926.2-201ENST00000623766 1308 ntBASIC14.26□□□□□ -0.13
PHF1O43189 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PHF1O43189 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PHF1O43189 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC14.26□□□□□ -0.13
PHF1O43189 MRPL20P1-201ENST00000400819 433 ntBASIC14.26□□□□□ -0.13
PHF1O43189 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.26□□□□□ -0.13
PHF1O43189 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC14.26□□□□□ -0.13
PHF1O43189 VN2R19P-201ENST00000442399 1052 ntBASIC14.26□□□□□ -0.13
PHF1O43189 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC14.26□□□□□ -0.13
PHF1O43189 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.26□□□□□ -0.13
PHF1O43189 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
PHF1O43189 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC14.26□□□□□ -0.13
PHF1O43189 PUS1-205ENST00000535067 838 ntTSL 3 BASIC14.26□□□□□ -0.13
PHF1O43189 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14.26□□□□□ -0.13
PHF1O43189 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC14.26□□□□□ -0.13
PHF1O43189 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14.26□□□□□ -0.13
PHF1O43189 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
PHF1O43189 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.26□□□□□ -0.13
PHF1O43189 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PHF1O43189 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14.26□□□□□ -0.13
PHF1O43189 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
PHF1O43189 AF228730.6-201ENST00000641497 218 ntBASIC14.26□□□□□ -0.13
PHF1O43189 AC084121.3-201ENST00000641716 218 ntBASIC14.26□□□□□ -0.13
PHF1O43189 AC105233.6-201ENST00000642093 218 ntBASIC14.26□□□□□ -0.13
PHF1O43189 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PHF1O43189 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC14.26□□□□□ -0.13
PHF1O43189 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
PHF1O43189 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms