Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLOCKO15516 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLOCKO15516 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.69■□□□□ 0.1
CLOCKO15516 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLOCKO15516 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLOCKO15516 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CLOCKO15516 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
CLOCKO15516 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLOCKO15516 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLOCKO15516 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CLOCKO15516 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC15.69■□□□□ 0.1
CLOCKO15516 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC15.69■□□□□ 0.1
CLOCKO15516 AC091607.1-201ENST00000490318 1060 ntBASIC15.69■□□□□ 0.1
CLOCKO15516 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.69■□□□□ 0.1
CLOCKO15516 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.69■□□□□ 0.1
CLOCKO15516 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC15.69■□□□□ 0.1
CLOCKO15516 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
CLOCKO15516 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CLOCKO15516 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC15.69■□□□□ 0.1
CLOCKO15516 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CLOCKO15516 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLOCKO15516 AC013467.2-201ENST00000605472 835 ntBASIC15.69■□□□□ 0.1
CLOCKO15516 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CLOCKO15516 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLOCKO15516 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC15.69■□□□□ 0.1
CLOCKO15516 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC15.69■□□□□ 0.1
CLOCKO15516 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CLOCKO15516 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLOCKO15516 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.69■□□□□ 0.1
CLOCKO15516 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CLOCKO15516 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLOCKO15516 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.69■□□□□ 0.1
CLOCKO15516 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC15.69■□□□□ 0.1
CLOCKO15516 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.69■□□□□ 0.1
CLOCKO15516 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CLOCKO15516 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLOCKO15516 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.69■□□□□ 0.1
CLOCKO15516 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CLOCKO15516 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CLOCKO15516 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CLOCKO15516 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLOCKO15516 AC006277.1-201ENST00000624348 1610 ntBASIC15.68■□□□□ 0.1
CLOCKO15516 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CLOCKO15516 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.68■□□□□ 0.1
CLOCKO15516 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLOCKO15516 AC013268.4-201ENST00000637413 2228 ntBASIC15.68■□□□□ 0.1
CLOCKO15516 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
CLOCKO15516 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.68■□□□□ 0.1
CLOCKO15516 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CLOCKO15516 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLOCKO15516 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CLOCKO15516 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC15.68■□□□□ 0.1
CLOCKO15516 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC15.68■□□□□ 0.1
CLOCKO15516 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC15.68■□□□□ 0.1
CLOCKO15516 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLOCKO15516 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLOCKO15516 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLOCKO15516 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLOCKO15516 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLOCKO15516 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLOCKO15516 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC15.68■□□□□ 0.1
CLOCKO15516 IGHV3-47-201ENST00000425060 335 ntBASIC15.68■□□□□ 0.1
CLOCKO15516 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
CLOCKO15516 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC15.68■□□□□ 0.1
CLOCKO15516 AP005901.3-202ENST00000581653 237 ntBASIC15.68■□□□□ 0.1
CLOCKO15516 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC15.68■□□□□ 0.1
CLOCKO15516 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CLOCKO15516 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CLOCKO15516 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLOCKO15516 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLOCKO15516 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.68■□□□□ 0.1
CLOCKO15516 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CLOCKO15516 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
CLOCKO15516 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.68■□□□□ 0.1
CLOCKO15516 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLOCKO15516 AP005117.1-202ENST00000581724 1908 ntBASIC15.68■□□□□ 0.1
CLOCKO15516 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
CLOCKO15516 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLOCKO15516 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLOCKO15516 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CLOCKO15516 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CLOCKO15516 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CLOCKO15516 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.68■□□□□ 0.1
CLOCKO15516 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CLOCKO15516 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLOCKO15516 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CLOCKO15516 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLOCKO15516 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLOCKO15516 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLOCKO15516 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.67■□□□□ 0.1
CLOCKO15516 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CLOCKO15516 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLOCKO15516 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CLOCKO15516 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
CLOCKO15516 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLOCKO15516 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CLOCKO15516 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CLOCKO15516 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
CLOCKO15516 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLOCKO15516 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms